Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
Hoxa9P09631 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Hoxa9P09631 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Hoxa9P09631 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Hoxa9P09631 Gm14220-201ENSMUST00000118114 449 ntBASIC5.9□□□□□ -1.46
Hoxa9P09631 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Hoxa9P09631 Gm11737-201ENSMUST00000118713 468 ntBASIC5.9□□□□□ -1.46
Hoxa9P09631 Gm7927-201ENSMUST00000118818 880 ntBASIC5.9□□□□□ -1.46
Hoxa9P09631 Gm13533-201ENSMUST00000121104 177 ntBASIC5.9□□□□□ -1.46
Hoxa9P09631 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC5.9□□□□□ -1.46
Hoxa9P09631 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Hoxa9P09631 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC5.9□□□□□ -1.46
Hoxa9P09631 Gm17121-201ENSMUST00000170414 847 ntBASIC5.9□□□□□ -1.46
Hoxa9P09631 Gm3242-201ENSMUST00000171273 485 ntBASIC5.9□□□□□ -1.46
Hoxa9P09631 Gm17222-201ENSMUST00000180135 847 ntBASIC5.9□□□□□ -1.46
Hoxa9P09631 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
Hoxa9P09631 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.46
Hoxa9P09631 Gm19231-201ENSMUST00000193212 830 ntBASIC5.9□□□□□ -1.46
Hoxa9P09631 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC5.9□□□□□ -1.46
Hoxa9P09631 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC5.9□□□□□ -1.46
Hoxa9P09631 Gm45874-201ENSMUST00000212423 346 ntBASIC5.9□□□□□ -1.46
Hoxa9P09631 AC112956.1-201ENSMUST00000213563 492 ntBASIC5.9□□□□□ -1.46
Hoxa9P09631 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Hoxa9P09631 Gm4012-201ENSMUST00000221504 581 ntBASIC5.9□□□□□ -1.46
Hoxa9P09631 Gm5087-204ENSMUST00000225820 645 ntBASIC5.9□□□□□ -1.46
Hoxa9P09631 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Hoxa9P09631 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Hoxa9P09631 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC5.9□□□□□ -1.46
Hoxa9P09631 Gm24029-201ENSMUST00000083928 143 ntBASIC5.9□□□□□ -1.46
Hoxa9P09631 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC5.9□□□□□ -1.46
Hoxa9P09631 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC5.9□□□□□ -1.47
Hoxa9P09631 Gm45548-201ENSMUST00000210076 3167 ntBASIC5.9□□□□□ -1.47
Hoxa9P09631 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Hoxa9P09631 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Hoxa9P09631 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Hoxa9P09631 Gm42798-201ENSMUST00000200853 3972 ntBASIC5.9□□□□□ -1.47
Hoxa9P09631 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Hoxa9P09631 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Hoxa9P09631 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Hoxa9P09631 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.47
Hoxa9P09631 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Hoxa9P09631 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC5.9□□□□□ -1.47
Hoxa9P09631 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Hoxa9P09631 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Hoxa9P09631 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Hoxa9P09631 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC5.9□□□□□ -1.47
Hoxa9P09631 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Hoxa9P09631 Gm38062-201ENSMUST00000192541 1856 ntBASIC5.9□□□□□ -1.47
Hoxa9P09631 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC5.9□□□□□ -1.47
Hoxa9P09631 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC5.89□□□□□ -1.47
Hoxa9P09631 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Hoxa9P09631 AC107232.1-201ENSMUST00000227785 1503 ntBASIC5.89□□□□□ -1.47
Hoxa9P09631 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Hoxa9P09631 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC5.89□□□□□ -1.47
Hoxa9P09631 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Hoxa9P09631 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC5.89□□□□□ -1.47
Hoxa9P09631 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Hoxa9P09631 Gm42436-201ENSMUST00000198804 3656 ntBASIC5.89□□□□□ -1.47
Hoxa9P09631 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Hoxa9P09631 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
Hoxa9P09631 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Hoxa9P09631 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Hoxa9P09631 Gm22592-201ENSMUST00000104242 131 ntBASIC5.89□□□□□ -1.47
Hoxa9P09631 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC5.89□□□□□ -1.47
Hoxa9P09631 Gm15660-201ENSMUST00000118997 478 ntBASIC5.89□□□□□ -1.47
Hoxa9P09631 Gm11617-201ENSMUST00000119609 639 ntBASIC5.89□□□□□ -1.47
Hoxa9P09631 Gm4234-201ENSMUST00000119747 714 ntBASIC5.89□□□□□ -1.47
Hoxa9P09631 Mup-ps19-201ENSMUST00000120390 519 ntBASIC5.89□□□□□ -1.47
Hoxa9P09631 Gm14065-201ENSMUST00000120848 585 ntBASIC5.89□□□□□ -1.47
Hoxa9P09631 Gm25826-201ENSMUST00000157090 137 ntBASIC5.89□□□□□ -1.47
Hoxa9P09631 Mir1970-201ENSMUST00000157839 104 ntBASIC5.89□□□□□ -1.47
Hoxa9P09631 Gm26086-201ENSMUST00000157902 263 ntBASIC5.89□□□□□ -1.47
Hoxa9P09631 Gm25489-201ENSMUST00000158727 141 ntBASIC5.89□□□□□ -1.47
Hoxa9P09631 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC5.89□□□□□ -1.47
Hoxa9P09631 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC5.89□□□□□ -1.47
Hoxa9P09631 Gm37341-201ENSMUST00000194680 371 ntBASIC5.89□□□□□ -1.47
Hoxa9P09631 Igkv4-56-201ENSMUST00000198436 349 ntBASIC5.89□□□□□ -1.47
Hoxa9P09631 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Hoxa9P09631 Gm4374-201ENSMUST00000204929 424 ntBASIC5.89□□□□□ -1.47
Hoxa9P09631 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC5.89□□□□□ -1.47
Hoxa9P09631 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC5.89□□□□□ -1.47
Hoxa9P09631 AC110381.1-201ENSMUST00000218987 586 ntBASIC5.89□□□□□ -1.47
Hoxa9P09631 AC166369.2-201ENSMUST00000228403 308 ntBASIC5.89□□□□□ -1.47
Hoxa9P09631 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
Hoxa9P09631 n-R5s215-201ENSMUST00000082480 104 ntBASIC5.89□□□□□ -1.47
Hoxa9P09631 Mir133b-201ENSMUST00000083546 119 ntBASIC5.89□□□□□ -1.47
Hoxa9P09631 Mir218-2-201ENSMUST00000083649 110 ntBASIC5.89□□□□□ -1.47
Hoxa9P09631 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Hoxa9P09631 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
Hoxa9P09631 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Hoxa9P09631 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC5.89□□□□□ -1.47
Hoxa9P09631 Gm9930-201ENSMUST00000066742 3151 ntBASIC5.89□□□□□ -1.47
Hoxa9P09631 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
Hoxa9P09631 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Hoxa9P09631 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Hoxa9P09631 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Hoxa9P09631 Gm38372-201ENSMUST00000194854 4028 ntBASIC5.89□□□□□ -1.47
Hoxa9P09631 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Hoxa9P09631 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Hoxa9P09631 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms