Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm37106-201ENSMUST00000193760 1532 ntBASIC5.88□□□□□ -1.47
Col4a6B1AVK5 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col4a6B1AVK5 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Col4a6B1AVK5 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col4a6B1AVK5 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col4a6B1AVK5 A130010J15Rik-203ENSMUST00000160822 3793 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
Col4a6B1AVK5 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Col4a6B1AVK5 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Col4a6B1AVK5 Gm11987-201ENSMUST00000118524 381 ntBASIC5.88□□□□□ -1.47
Col4a6B1AVK5 Gm11975-201ENSMUST00000118772 481 ntBASIC5.88□□□□□ -1.47
Col4a6B1AVK5 Gm25176-201ENSMUST00000122640 125 ntBASIC5.88□□□□□ -1.47
Col4a6B1AVK5 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Col4a6B1AVK5 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Col4a6B1AVK5 Gm17907-201ENSMUST00000173150 710 ntBASIC5.88□□□□□ -1.47
Col4a6B1AVK5 Mir6400-201ENSMUST00000184870 92 ntBASIC5.88□□□□□ -1.47
Col4a6B1AVK5 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col4a6B1AVK5 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC5.88□□□□□ -1.47
Col4a6B1AVK5 AC238676.3-201ENSMUST00000223042 154 ntBASIC5.88□□□□□ -1.47
Col4a6B1AVK5 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC5.88□□□□□ -1.47
Col4a6B1AVK5 Mir412-201ENSMUST00000083636 80 ntBASIC5.88□□□□□ -1.47
Col4a6B1AVK5 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col4a6B1AVK5 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col4a6B1AVK5 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC5.87□□□□□ -1.47
Col4a6B1AVK5 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col4a6B1AVK5 AC115289.2-201ENSMUST00000223836 2803 ntBASIC5.87□□□□□ -1.47
Col4a6B1AVK5 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Col4a6B1AVK5 Gm34294-201ENSMUST00000191912 4263 ntBASIC5.87□□□□□ -1.47
Col4a6B1AVK5 Hecw2-203ENSMUST00000120904 11263 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Col4a6B1AVK5 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Col4a6B1AVK5 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC5.87□□□□□ -1.47
Col4a6B1AVK5 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col4a6B1AVK5 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC5.87□□□□□ -1.47
Col4a6B1AVK5 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col4a6B1AVK5 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC5.87□□□□□ -1.47
Col4a6B1AVK5 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC5.87□□□□□ -1.47
Col4a6B1AVK5 Cacna1c-207ENSMUST00000186889 13162 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col4a6B1AVK5 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col4a6B1AVK5 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
Col4a6B1AVK5 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col4a6B1AVK5 Gm23513-201ENSMUST00000158181 133 ntBASIC5.87□□□□□ -1.47
Col4a6B1AVK5 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col4a6B1AVK5 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Col4a6B1AVK5 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Col4a6B1AVK5 Gm5372-201ENSMUST00000187540 409 ntBASIC5.87□□□□□ -1.47
Col4a6B1AVK5 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC5.87□□□□□ -1.47
Col4a6B1AVK5 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Col4a6B1AVK5 Gm29736-201ENSMUST00000198189 385 ntBASIC5.87□□□□□ -1.47
Col4a6B1AVK5 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Col4a6B1AVK5 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC5.87□□□□□ -1.47
Col4a6B1AVK5 Gm8291-201ENSMUST00000209635 1261 ntBASIC5.87□□□□□ -1.47
Col4a6B1AVK5 Supt4b-201ENSMUST00000214434 351 ntBASIC5.87□□□□□ -1.47
Col4a6B1AVK5 Gm21041-201ENSMUST00000214829 823 ntBASIC5.87□□□□□ -1.47
Col4a6B1AVK5 AC153505.2-201ENSMUST00000217741 277 ntBASIC5.87□□□□□ -1.47
Col4a6B1AVK5 AC161383.1-201ENSMUST00000227356 527 ntBASIC5.87□□□□□ -1.47
Col4a6B1AVK5 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col4a6B1AVK5 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col4a6B1AVK5 Gm22741-201ENSMUST00000083438 165 ntBASIC5.87□□□□□ -1.47
Col4a6B1AVK5 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Col4a6B1AVK5 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Col4a6B1AVK5 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
Col4a6B1AVK5 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col4a6B1AVK5 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col4a6B1AVK5 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
Col4a6B1AVK5 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Col4a6B1AVK5 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Col4a6B1AVK5 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col4a6B1AVK5 Gm45112-201ENSMUST00000208576 5125 ntBASIC5.86□□□□□ -1.47
Col4a6B1AVK5 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col4a6B1AVK5 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col4a6B1AVK5 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Col4a6B1AVK5 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Col4a6B1AVK5 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col4a6B1AVK5 Muc6-203ENSMUST00000190907 8757 ntAPPRIS P5 TSL 5 BASIC5.86□□□□□ -1.47
Col4a6B1AVK5 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col4a6B1AVK5 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC5.86□□□□□ -1.47
Col4a6B1AVK5 Gm13928-201ENSMUST00000120326 1732 ntBASIC5.86□□□□□ -1.47
Col4a6B1AVK5 AC139758.3-201ENSMUST00000226853 2704 ntBASIC5.86□□□□□ -1.47
Col4a6B1AVK5 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col4a6B1AVK5 Ikbkg-207ENSMUST00000114133 6994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col4a6B1AVK5 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col4a6B1AVK5 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Col4a6B1AVK5 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col4a6B1AVK5 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC5.86□□□□□ -1.47
Col4a6B1AVK5 Gm13435-201ENSMUST00000120111 1023 ntBASIC5.86□□□□□ -1.47
Col4a6B1AVK5 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC5.86□□□□□ -1.47
Col4a6B1AVK5 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col4a6B1AVK5 Gm3170-201ENSMUST00000168753 850 ntBASIC5.86□□□□□ -1.47
Col4a6B1AVK5 Gm8256-201ENSMUST00000169178 453 ntBASIC5.86□□□□□ -1.47
Col4a6B1AVK5 Gm3348-201ENSMUST00000177813 850 ntBASIC5.86□□□□□ -1.47
Col4a6B1AVK5 Gm19206-201ENSMUST00000186401 827 ntBASIC5.86□□□□□ -1.47
Col4a6B1AVK5 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col4a6B1AVK5 Gm43175-201ENSMUST00000198450 3810 ntBASIC5.86□□□□□ -1.47
Col4a6B1AVK5 Gm44580-201ENSMUST00000206333 877 ntBASIC5.86□□□□□ -1.47
Col4a6B1AVK5 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
Col4a6B1AVK5 CT030705.1-201ENSMUST00000223971 533 ntBASIC5.86□□□□□ -1.47
Col4a6B1AVK5 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Col4a6B1AVK5 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col4a6B1AVK5 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Col4a6B1AVK5 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
Col4a6B1AVK5 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms