Protein–RNA interactions for Protein: A4IF42

Gm4559, ENSMUSG00000056885 protein (Fragment), mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4559A4IF42 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Muc2-201ENSMUST00000026590 2032 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Efna5-201ENSMUST00000076840 4032 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Phc1-202ENSMUST00000081849 3683 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Gm44578-201ENSMUST00000207236 3835 ntBASIC1.45□□□□□ -2.18
Gm4559A4IF42 AC156569.1-201ENSMUST00000222020 3841 ntBASIC1.45□□□□□ -2.18
Gm4559A4IF42 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Tcp10b-201ENSMUST00000086787 2327 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Gm5855-201ENSMUST00000200240 1305 ntBASIC1.45□□□□□ -2.18
Gm4559A4IF42 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Tpd52l2-201ENSMUST00000000844 2950 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Itgam-203ENSMUST00000106242 4649 ntAPPRIS P3 TSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Gm12626-201ENSMUST00000117339 1983 ntBASIC1.45□□□□□ -2.18
Gm4559A4IF42 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 AC123842.1-201ENSMUST00000217622 3118 ntTSL 5 BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Birc2-202ENSMUST00000074246 3130 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Hmgcr-201ENSMUST00000022176 4425 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Nell1-202ENSMUST00000107603 2756 ntTSL 5 BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Arhgap28-203ENSMUST00000164647 2754 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Mak-203ENSMUST00000165087 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Gm9936-201ENSMUST00000201635 2925 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Rnf216-209ENSMUST00000200607 3704 ntAPPRIS P3 TSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Gm4559A4IF42 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Trpc5-201ENSMUST00000040184 4158 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Lox-202ENSMUST00000171470 4468 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Gm6189-201ENSMUST00000164487 2082 ntBASIC1.45□□□□□ -2.18
Gm4559A4IF42 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Mir598-201ENSMUST00000102094 79 ntBASIC1.45□□□□□ -2.18
Gm4559A4IF42 Gm24715-201ENSMUST00000102377 95 ntBASIC1.45□□□□□ -2.18
Gm4559A4IF42 Mir676-201ENSMUST00000102443 89 ntBASIC1.45□□□□□ -2.18
Gm4559A4IF42 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Gm25407-201ENSMUST00000104102 134 ntBASIC1.45□□□□□ -2.18
Gm4559A4IF42 Gm24170-201ENSMUST00000104124 133 ntBASIC1.45□□□□□ -2.18
Gm4559A4IF42 Gm23573-201ENSMUST00000104408 107 ntBASIC1.45□□□□□ -2.18
Gm4559A4IF42 Gm25560-201ENSMUST00000104606 176 ntBASIC1.45□□□□□ -2.18
Gm4559A4IF42 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Cd59b-203ENSMUST00000111131 555 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Gm4559A4IF42 Fam220-ps-201ENSMUST00000116535 783 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms