Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 Gm37653-201ENSMUST00000195401 3578 ntBASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 Mir763-201ENSMUST00000103249 120 ntBASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 Gm24935-201ENSMUST00000103770 110 ntBASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 Gm25167-201ENSMUST00000104188 120 ntBASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 Cisd3-202ENSMUST00000107584 546 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 Gm10241-201ENSMUST00000117664 286 ntBASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 Gm7071-201ENSMUST00000120458 462 ntBASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 Gm15501-202ENSMUST00000140687 625 ntBASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 Gm23117-201ENSMUST00000158482 108 ntBASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 Gm23028-201ENSMUST00000158773 265 ntBASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 Gm6838-201ENSMUST00000172851 582 ntBASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 Mir3072-201ENSMUST00000175610 83 ntBASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 Gm15251-201ENSMUST00000177947 883 ntBASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 Gm27013-201ENSMUST00000182441 1024 ntBASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 Gm37243-201ENSMUST00000193407 595 ntBASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 Gm8458-201ENSMUST00000196658 819 ntBASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 Gm43856-201ENSMUST00000197004 369 ntBASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 Gm43098-201ENSMUST00000199989 1297 ntBASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 Gm44604-201ENSMUST00000205475 496 ntBASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 E230032D23Rik-203ENSMUST00000208797 856 ntBASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 Gm45366-201ENSMUST00000209828 384 ntBASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 Gm6667-201ENSMUST00000217169 564 ntBASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 Gm8681-201ENSMUST00000219115 618 ntBASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 Gm4263-202ENSMUST00000221392 667 ntBASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 AC163038.4-201ENSMUST00000224942 474 ntBASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 AC129537.1-202ENSMUST00000226619 430 ntBASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 AC154806.1-202ENSMUST00000227949 885 ntBASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 Gm9801-201ENSMUST00000054860 408 ntBASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 Gucy1a3-201ENSMUST00000048976 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 Gm43023-201ENSMUST00000197583 2106 ntBASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 Pramef20-201ENSMUST00000121109 1434 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 Gm13712-201ENSMUST00000117484 2295 ntBASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Shisa3Q3UPR0 Gm44046-201ENSMUST00000203145 2678 ntBASIC6.22□□□□□ -1.41
Shisa3Q3UPR0 Gm6823-201ENSMUST00000120791 1839 ntBASIC6.22□□□□□ -1.41
Shisa3Q3UPR0 Gm18632-201ENSMUST00000222597 2087 ntBASIC6.22□□□□□ -1.41
Shisa3Q3UPR0 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Shisa3Q3UPR0 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Shisa3Q3UPR0 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC6.22□□□□□ -1.41
Shisa3Q3UPR0 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Shisa3Q3UPR0 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Shisa3Q3UPR0 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Shisa3Q3UPR0 Gm6767-201ENSMUST00000118650 1381 ntBASIC6.22□□□□□ -1.41
Shisa3Q3UPR0 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Shisa3Q3UPR0 Klf5-202ENSMUST00000226784 2852 ntBASIC6.22□□□□□ -1.41
Shisa3Q3UPR0 Tex14-201ENSMUST00000060835 4763 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Shisa3Q3UPR0 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Shisa3Q3UPR0 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.22□□□□□ -1.41
Shisa3Q3UPR0 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Shisa3Q3UPR0 Gm44228-201ENSMUST00000204888 2026 ntBASIC6.22□□□□□ -1.41
Shisa3Q3UPR0 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Shisa3Q3UPR0 Gm18954-201ENSMUST00000222200 1792 ntBASIC6.22□□□□□ -1.41
Shisa3Q3UPR0 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Shisa3Q3UPR0 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Shisa3Q3UPR0 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC6.22□□□□□ -1.41
Shisa3Q3UPR0 Igkv8-30-201ENSMUST00000103378 368 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Shisa3Q3UPR0 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Shisa3Q3UPR0 Amelx-203ENSMUST00000112119 841 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Shisa3Q3UPR0 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Shisa3Q3UPR0 Gm24195-201ENSMUST00000116804 137 ntBASIC6.22□□□□□ -1.41
Shisa3Q3UPR0 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC6.22□□□□□ -1.41
Shisa3Q3UPR0 Gm5752-201ENSMUST00000117771 594 ntBASIC6.22□□□□□ -1.41
Shisa3Q3UPR0 Gm12230-201ENSMUST00000118301 454 ntBASIC6.22□□□□□ -1.41
Shisa3Q3UPR0 Gm14156-201ENSMUST00000121538 483 ntBASIC6.22□□□□□ -1.41
Shisa3Q3UPR0 Gm28053-201ENSMUST00000127537 350 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
Shisa3Q3UPR0 Rps16-ps2-201ENSMUST00000140155 441 ntBASIC6.22□□□□□ -1.41
Shisa3Q3UPR0 4930594O21Rik-202ENSMUST00000144981 682 ntTSL 3 BASIC6.22□□□□□ -1.41
Shisa3Q3UPR0 Gm22262-201ENSMUST00000158713 86 ntBASIC6.22□□□□□ -1.41
Shisa3Q3UPR0 Nrbf2-202ENSMUST00000159002 583 ntTSL 3 BASIC6.22□□□□□ -1.41
Shisa3Q3UPR0 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC6.22□□□□□ -1.41
Shisa3Q3UPR0 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC6.22□□□□□ -1.41
Shisa3Q3UPR0 Gm22166-201ENSMUST00000178419 121 ntBASIC6.22□□□□□ -1.41
Shisa3Q3UPR0 Gm23288-201ENSMUST00000179213 121 ntBASIC6.22□□□□□ -1.41
Shisa3Q3UPR0 Gm29015-201ENSMUST00000187147 207 ntTSL 5 BASIC6.22□□□□□ -1.41
Shisa3Q3UPR0 Gm29273-201ENSMUST00000188880 262 ntBASIC6.22□□□□□ -1.41
Shisa3Q3UPR0 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Shisa3Q3UPR0 1700016L21Rik-202ENSMUST00000189139 629 ntTSL 3 BASIC6.22□□□□□ -1.41
Shisa3Q3UPR0 Gm37481-201ENSMUST00000195176 403 ntBASIC6.22□□□□□ -1.41
Shisa3Q3UPR0 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 93.3 ms