Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm4342-201ENSMUST00000118982 367 ntBASIC5.7□□□□□ -1.5
Trafd1Q3UDK1 Gm15877-201ENSMUST00000121897 964 ntBASIC5.7□□□□□ -1.5
Trafd1Q3UDK1 Gm13363-201ENSMUST00000122008 522 ntBASIC5.7□□□□□ -1.5
Trafd1Q3UDK1 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Trafd1Q3UDK1 Gm26106-201ENSMUST00000157254 228 ntBASIC5.7□□□□□ -1.5
Trafd1Q3UDK1 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Trafd1Q3UDK1 Gm7713-201ENSMUST00000181201 1007 ntBASIC5.7□□□□□ -1.5
Trafd1Q3UDK1 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC5.7□□□□□ -1.5
Trafd1Q3UDK1 Gm21461-201ENSMUST00000200382 863 ntBASIC5.7□□□□□ -1.5
Trafd1Q3UDK1 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC5.7□□□□□ -1.5
Trafd1Q3UDK1 Gm44134-202ENSMUST00000204777 545 ntBASIC5.7□□□□□ -1.5
Trafd1Q3UDK1 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Trafd1Q3UDK1 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC5.7□□□□□ -1.5
Trafd1Q3UDK1 AC154767.2-201ENSMUST00000224584 414 ntBASIC5.7□□□□□ -1.5
Trafd1Q3UDK1 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Trafd1Q3UDK1 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC5.7□□□□□ -1.5
Trafd1Q3UDK1 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Trafd1Q3UDK1 Gm5949-201ENSMUST00000213468 1421 ntBASIC5.7□□□□□ -1.5
Trafd1Q3UDK1 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Trafd1Q3UDK1 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trafd1Q3UDK1 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC5.7□□□□□ -1.5
Trafd1Q3UDK1 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Trafd1Q3UDK1 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Trafd1Q3UDK1 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC5.7□□□□□ -1.5
Trafd1Q3UDK1 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trafd1Q3UDK1 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC5.7□□□□□ -1.5
Trafd1Q3UDK1 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Gm19125-201ENSMUST00000188408 1383 ntBASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Gm7919-201ENSMUST00000202043 1389 ntBASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Gm18878-201ENSMUST00000223071 1443 ntBASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Mir700-201ENSMUST00000102169 79 ntBASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Gm15660-201ENSMUST00000118997 478 ntBASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Gm14237-201ENSMUST00000122080 430 ntBASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Gm23539-201ENSMUST00000157537 224 ntBASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Gm22599-201ENSMUST00000157597 132 ntBASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Gm23030-201ENSMUST00000158004 273 ntBASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Gm25227-201ENSMUST00000158204 112 ntBASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Gm17044-201ENSMUST00000168549 828 ntBASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Gm8032-201ENSMUST00000171009 574 ntBASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Gm27854-201ENSMUST00000175578 244 ntBASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Gm37719-201ENSMUST00000194615 292 ntBASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 AC157822.1-201ENSMUST00000196643 80 ntBASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Gm31306-201ENSMUST00000197517 508 ntBASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Gm43148-201ENSMUST00000198237 520 ntBASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Gm44253-201ENSMUST00000203387 628 ntBASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Gm44251-201ENSMUST00000204963 442 ntBASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 AC159246.1-201ENSMUST00000214478 249 ntBASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Gm7802-201ENSMUST00000216464 262 ntBASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Gm19116-201ENSMUST00000218592 642 ntBASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 AC165092.4-201ENSMUST00000225025 679 ntBASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Mir298-201ENSMUST00000083476 82 ntBASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Gm23502-201ENSMUST00000083902 145 ntBASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Gm46199-201ENSMUST00000220373 1693 ntBASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trafd1Q3UDK1 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC5.68□□□□□ -1.5
Trafd1Q3UDK1 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trafd1Q3UDK1 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trafd1Q3UDK1 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trafd1Q3UDK1 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trafd1Q3UDK1 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
Trafd1Q3UDK1 Gm44829-201ENSMUST00000208008 3193 ntBASIC5.68□□□□□ -1.5
Trafd1Q3UDK1 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Trafd1Q3UDK1 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Trafd1Q3UDK1 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Trafd1Q3UDK1 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 183.3 ms