Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cacna1aP97445 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Cacna1aP97445 Igkv15-101-201ENSMUST00000195917 299 ntBASIC5.35□□□□□ -1.55
Cacna1aP97445 Gm2607-201ENSMUST00000212389 627 ntBASIC5.35□□□□□ -1.55
Cacna1aP97445 AC158523.2-201ENSMUST00000222708 548 ntBASIC5.35□□□□□ -1.55
Cacna1aP97445 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Cacna1aP97445 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cacna1aP97445 Icos-202ENSMUST00000102827 3241 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cacna1aP97445 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Cacna1aP97445 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cacna1aP97445 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
Cacna1aP97445 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cacna1aP97445 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cacna1aP97445 Gm43162-201ENSMUST00000198292 1770 ntBASIC5.35□□□□□ -1.55
Cacna1aP97445 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cacna1aP97445 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
Cacna1aP97445 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Cacna1aP97445 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Cacna1aP97445 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Cacna1aP97445 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Cacna1aP97445 Gm11759-201ENSMUST00000121742 464 ntBASIC5.35□□□□□ -1.55
Cacna1aP97445 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC5.35□□□□□ -1.55
Cacna1aP97445 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC5.35□□□□□ -1.55
Cacna1aP97445 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC5.35□□□□□ -1.55
Cacna1aP97445 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC5.35□□□□□ -1.55
Cacna1aP97445 Ighv1-35-201ENSMUST00000195265 351 ntBASIC5.35□□□□□ -1.55
Cacna1aP97445 Gm32158-201ENSMUST00000200135 404 ntBASIC5.35□□□□□ -1.55
Cacna1aP97445 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC5.35□□□□□ -1.55
Cacna1aP97445 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC5.35□□□□□ -1.55
Cacna1aP97445 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cacna1aP97445 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cacna1aP97445 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Cacna1aP97445 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Cacna1aP97445 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Cacna1aP97445 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cacna1aP97445 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Cacna1aP97445 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cacna1aP97445 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cacna1aP97445 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cacna1aP97445 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cacna1aP97445 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cacna1aP97445 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC5.34□□□□□ -1.55
Cacna1aP97445 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cacna1aP97445 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cacna1aP97445 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cacna1aP97445 A630009H07Rik-201ENSMUST00000208485 2159 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cacna1aP97445 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cacna1aP97445 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cacna1aP97445 Gm43496-201ENSMUST00000201682 3001 ntBASIC5.34□□□□□ -1.55
Cacna1aP97445 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cacna1aP97445 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Cacna1aP97445 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cacna1aP97445 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Cacna1aP97445 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Cacna1aP97445 Gm5946-201ENSMUST00000182340 970 ntBASIC5.34□□□□□ -1.55
Cacna1aP97445 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cacna1aP97445 Gm37308-201ENSMUST00000194684 100 ntBASIC5.34□□□□□ -1.55
Cacna1aP97445 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC5.34□□□□□ -1.55
Cacna1aP97445 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cacna1aP97445 AC154788.1-201ENSMUST00000225003 340 ntBASIC5.34□□□□□ -1.55
Cacna1aP97445 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cacna1aP97445 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cacna1aP97445 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cacna1aP97445 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cacna1aP97445 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC5.34□□□□□ -1.55
Cacna1aP97445 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Cacna1aP97445 AC139941.2-201ENSMUST00000221565 1824 ntBASIC5.34□□□□□ -1.55
Cacna1aP97445 Olfr96-203ENSMUST00000214482 2161 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Cacna1aP97445 Gm37894-201ENSMUST00000195416 2599 ntBASIC5.34□□□□□ -1.55
Cacna1aP97445 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cacna1aP97445 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cacna1aP97445 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cacna1aP97445 Gm10845-202ENSMUST00000228217 3389 ntBASIC5.34□□□□□ -1.55
Cacna1aP97445 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cacna1aP97445 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Cacna1aP97445 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.56
Cacna1aP97445 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Cacna1aP97445 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC5.34□□□□□ -1.56
Cacna1aP97445 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Cacna1aP97445 Vis1-201ENSMUST00000183957 201 ntBASIC5.34□□□□□ -1.56
Cacna1aP97445 Gm27855-201ENSMUST00000184122 128 ntBASIC5.34□□□□□ -1.56
Cacna1aP97445 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC5.34□□□□□ -1.56
Cacna1aP97445 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC5.34□□□□□ -1.56
Cacna1aP97445 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC5.34□□□□□ -1.56
Cacna1aP97445 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.56
Cacna1aP97445 AC153943.1-201ENSMUST00000219312 256 ntBASIC5.34□□□□□ -1.56
Cacna1aP97445 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC5.34□□□□□ -1.56
Cacna1aP97445 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Cacna1aP97445 n-R5s161-201ENSMUST00000083728 114 ntBASIC5.34□□□□□ -1.56
Cacna1aP97445 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC5.34□□□□□ -1.56
Cacna1aP97445 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Cacna1aP97445 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cacna1aP97445 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Cacna1aP97445 AC154576.1-202ENSMUST00000223966 3320 ntBASIC5.33□□□□□ -1.56
Cacna1aP97445 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Cacna1aP97445 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC5.33□□□□□ -1.56
Cacna1aP97445 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC5.33□□□□□ -1.56
Cacna1aP97445 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Cacna1aP97445 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC5.33□□□□□ -1.56
Cacna1aP97445 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms