Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Tpm1P58771 Gm37482-201ENSMUST00000194899 2791 ntBASIC6.25□□□□□ -1.41
Tpm1P58771 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Tpm1P58771 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
Tpm1P58771 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Tpm1P58771 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Tpm1P58771 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Tpm1P58771 Gm38299-201ENSMUST00000193214 3789 ntBASIC6.24□□□□□ -1.41
Tpm1P58771 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Tpm1P58771 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Tpm1P58771 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Tpm1P58771 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Tpm1P58771 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Tpm1P58771 Gm37930-201ENSMUST00000194308 1886 ntBASIC6.24□□□□□ -1.41
Tpm1P58771 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Tpm1P58771 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC6.24□□□□□ -1.41
Tpm1P58771 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Tpm1P58771 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Tpm1P58771 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Tpm1P58771 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC6.24□□□□□ -1.41
Tpm1P58771 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Tpm1P58771 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Tpm1P58771 Gm12732-201ENSMUST00000121688 180 ntBASIC6.24□□□□□ -1.41
Tpm1P58771 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC6.24□□□□□ -1.41
Tpm1P58771 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Tpm1P58771 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Tpm1P58771 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Tpm1P58771 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC6.24□□□□□ -1.41
Tpm1P58771 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Tpm1P58771 Gm28918-201ENSMUST00000188822 699 ntBASIC6.24□□□□□ -1.41
Tpm1P58771 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Tpm1P58771 Gm21577-201ENSMUST00000190823 697 ntBASIC6.24□□□□□ -1.41
Tpm1P58771 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC6.24□□□□□ -1.41
Tpm1P58771 Gm35013-201ENSMUST00000197218 832 ntBASIC6.24□□□□□ -1.41
Tpm1P58771 Gm43148-201ENSMUST00000198237 520 ntBASIC6.24□□□□□ -1.41
Tpm1P58771 Gm3912-203ENSMUST00000211024 367 ntBASIC6.24□□□□□ -1.41
Tpm1P58771 AC155922.1-201ENSMUST00000220100 373 ntBASIC6.24□□□□□ -1.41
Tpm1P58771 AC124732.4-201ENSMUST00000220930 1274 ntBASIC6.24□□□□□ -1.41
Tpm1P58771 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC6.24□□□□□ -1.41
Tpm1P58771 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC6.24□□□□□ -1.41
Tpm1P58771 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC6.24□□□□□ -1.41
Tpm1P58771 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Tpm1P58771 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Tpm1P58771 Gm37018-201ENSMUST00000192441 3869 ntBASIC6.24□□□□□ -1.41
Tpm1P58771 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC6.24□□□□□ -1.41
Tpm1P58771 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC6.24□□□□□ -1.41
Tpm1P58771 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Tpm1P58771 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC6.24□□□□□ -1.41
Tpm1P58771 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC6.24□□□□□ -1.41
Tpm1P58771 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Tpm1P58771 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Tpm1P58771 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC6.23□□□□□ -1.41
Tpm1P58771 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Tpm1P58771 Gm44675-201ENSMUST00000208188 2927 ntBASIC6.23□□□□□ -1.41
Tpm1P58771 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Tpm1P58771 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
Tpm1P58771 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Tpm1P58771 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Tpm1P58771 Gm5512-201ENSMUST00000218013 1353 ntBASIC6.23□□□□□ -1.41
Tpm1P58771 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
Tpm1P58771 Mir292-201ENSMUST00000104847 82 ntBASIC6.23□□□□□ -1.41
Tpm1P58771 Gm13739-201ENSMUST00000118020 530 ntBASIC6.23□□□□□ -1.41
Tpm1P58771 Gm11624-201ENSMUST00000118579 1041 ntBASIC6.23□□□□□ -1.41
Tpm1P58771 Gm6620-201ENSMUST00000120113 715 ntBASIC6.23□□□□□ -1.41
Tpm1P58771 Gm11472-201ENSMUST00000121305 556 ntBASIC6.23□□□□□ -1.41
Tpm1P58771 Gm15164-201ENSMUST00000122203 271 ntBASIC6.23□□□□□ -1.41
Tpm1P58771 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC6.23□□□□□ -1.41
Tpm1P58771 Gm26106-201ENSMUST00000157254 228 ntBASIC6.23□□□□□ -1.41
Tpm1P58771 Gm10087-201ENSMUST00000167650 330 ntBASIC6.23□□□□□ -1.41
Tpm1P58771 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC6.23□□□□□ -1.41
Tpm1P58771 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Tpm1P58771 Vis1-201ENSMUST00000183957 201 ntBASIC6.23□□□□□ -1.41
Tpm1P58771 Gm5260-201ENSMUST00000186157 949 ntBASIC6.23□□□□□ -1.41
Tpm1P58771 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC6.23□□□□□ -1.41
Tpm1P58771 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Tpm1P58771 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Tpm1P58771 Gm9317-201ENSMUST00000197055 862 ntBASIC6.23□□□□□ -1.41
Tpm1P58771 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Tpm1P58771 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC6.23□□□□□ -1.41
Tpm1P58771 Gm5990-201ENSMUST00000203126 746 ntBASIC6.23□□□□□ -1.41
Tpm1P58771 Gm7351-201ENSMUST00000210745 580 ntBASIC6.23□□□□□ -1.41
Tpm1P58771 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC6.23□□□□□ -1.41
Tpm1P58771 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Tpm1P58771 Gm37738-201ENSMUST00000192396 4716 ntBASIC6.23□□□□□ -1.41
Tpm1P58771 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Tpm1P58771 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Tpm1P58771 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Tpm1P58771 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Tpm1P58771 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Tpm1P58771 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Tpm1P58771 Gm29488-201ENSMUST00000191427 2402 ntBASIC6.23□□□□□ -1.41
Tpm1P58771 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Tpm1P58771 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Tpm1P58771 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Tpm1P58771 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Tpm1P58771 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC6.22□□□□□ -1.41
Tpm1P58771 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Tpm1P58771 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
Tpm1P58771 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Tpm1P58771 Gm37606-201ENSMUST00000191816 3116 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms