Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Gm9278-201ENSMUST00000205508 553 ntBASIC5.28□□□□□ -1.56
Nkx2-2P42586 Gm45628-201ENSMUST00000210849 274 ntBASIC5.28□□□□□ -1.56
Nkx2-2P42586 Gm7990-201ENSMUST00000212126 593 ntBASIC5.28□□□□□ -1.56
Nkx2-2P42586 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Nkx2-2P42586 AC133203.2-201ENSMUST00000226709 464 ntBASIC5.28□□□□□ -1.56
Nkx2-2P42586 AC102139.1-201ENSMUST00000227000 251 ntBASIC5.28□□□□□ -1.56
Nkx2-2P42586 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC5.28□□□□□ -1.56
Nkx2-2P42586 Gm6563-201ENSMUST00000056396 869 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Nkx2-2P42586 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Nkx2-2P42586 Gm23795-201ENSMUST00000084006 137 ntBASIC5.28□□□□□ -1.56
Nkx2-2P42586 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
Nkx2-2P42586 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC5.28□□□□□ -1.56
Nkx2-2P42586 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Nkx2-2P42586 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Nkx2-2P42586 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC5.28□□□□□ -1.56
Nkx2-2P42586 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Nkx2-2P42586 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Nkx2-2P42586 Gm2223-201ENSMUST00000112099 1350 ntBASIC5.28□□□□□ -1.56
Nkx2-2P42586 Gm37775-201ENSMUST00000194120 2313 ntBASIC5.28□□□□□ -1.56
Nkx2-2P42586 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Nkx2-2P42586 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
Nkx2-2P42586 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Nkx2-2P42586 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Nkx2-2P42586 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC5.27□□□□□ -1.57
Nkx2-2P42586 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Nkx2-2P42586 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Nkx2-2P42586 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Nkx2-2P42586 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Nkx2-2P42586 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Nkx2-2P42586 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC5.27□□□□□ -1.57
Nkx2-2P42586 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Nkx2-2P42586 Gm14772-201ENSMUST00000116562 514 ntBASIC5.27□□□□□ -1.57
Nkx2-2P42586 Gm11270-201ENSMUST00000117685 471 ntBASIC5.27□□□□□ -1.57
Nkx2-2P42586 Gm11848-201ENSMUST00000121207 973 ntBASIC5.27□□□□□ -1.57
Nkx2-2P42586 Gm23430-201ENSMUST00000122490 314 ntBASIC5.27□□□□□ -1.57
Nkx2-2P42586 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Nkx2-2P42586 Gm8032-201ENSMUST00000171009 574 ntBASIC5.27□□□□□ -1.57
Nkx2-2P42586 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC5.27□□□□□ -1.57
Nkx2-2P42586 Gm20530-201ENSMUST00000174261 254 ntBASIC5.27□□□□□ -1.57
Nkx2-2P42586 Gm19791-201ENSMUST00000180398 859 ntBASIC5.27□□□□□ -1.57
Nkx2-2P42586 Gm16531-201ENSMUST00000180658 967 ntBASIC5.27□□□□□ -1.57
Nkx2-2P42586 Gm2539-203ENSMUST00000181352 746 ntBASIC5.27□□□□□ -1.57
Nkx2-2P42586 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC5.27□□□□□ -1.57
Nkx2-2P42586 Gm18799-201ENSMUST00000189104 913 ntBASIC5.27□□□□□ -1.57
Nkx2-2P42586 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC5.27□□□□□ -1.57
Nkx2-2P42586 Gm8141-201ENSMUST00000190856 1723 ntBASIC5.27□□□□□ -1.57
Nkx2-2P42586 Gm37355-201ENSMUST00000193345 606 ntBASIC5.27□□□□□ -1.57
Nkx2-2P42586 Ighv5-19-201ENSMUST00000193466 297 ntBASIC5.27□□□□□ -1.57
Nkx2-2P42586 Gm17952-201ENSMUST00000193914 747 ntBASIC5.27□□□□□ -1.57
Nkx2-2P42586 Gm29745-201ENSMUST00000198005 687 ntBASIC5.27□□□□□ -1.57
Nkx2-2P42586 Gm43148-201ENSMUST00000198237 520 ntBASIC5.27□□□□□ -1.57
Nkx2-2P42586 Gm43485-201ENSMUST00000199292 1710 ntBASIC5.27□□□□□ -1.57
Nkx2-2P42586 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC5.27□□□□□ -1.57
Nkx2-2P42586 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC5.27□□□□□ -1.57
Nkx2-2P42586 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Nkx2-2P42586 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC5.27□□□□□ -1.57
Nkx2-2P42586 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC5.27□□□□□ -1.57
Nkx2-2P42586 AC126554.4-201ENSMUST00000221055 409 ntBASIC5.27□□□□□ -1.57
Nkx2-2P42586 AC124356.2-201ENSMUST00000221874 336 ntBASIC5.27□□□□□ -1.57
Nkx2-2P42586 AC211878.6-201ENSMUST00000221896 358 ntBASIC5.27□□□□□ -1.57
Nkx2-2P42586 AC126554.2-201ENSMUST00000223259 400 ntBASIC5.27□□□□□ -1.57
Nkx2-2P42586 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Nkx2-2P42586 Gm7887-201ENSMUST00000056948 537 ntBASIC5.27□□□□□ -1.57
Nkx2-2P42586 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Nkx2-2P42586 Gm25099-201ENSMUST00000093716 116 ntBASIC5.27□□□□□ -1.57
Nkx2-2P42586 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Nkx2-2P42586 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Nkx2-2P42586 Gm37773-201ENSMUST00000194141 2120 ntBASIC5.27□□□□□ -1.57
Nkx2-2P42586 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Nkx2-2P42586 Gm43845-201ENSMUST00000202462 1820 ntBASIC5.27□□□□□ -1.57
Nkx2-2P42586 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC5.27□□□□□ -1.57
Nkx2-2P42586 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Nkx2-2P42586 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Nkx2-2P42586 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Nkx2-2P42586 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Nkx2-2P42586 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC5.26□□□□□ -1.57
Nkx2-2P42586 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Nkx2-2P42586 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Nkx2-2P42586 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Nkx2-2P42586 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
Nkx2-2P42586 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Nkx2-2P42586 Gm42508-201ENSMUST00000199972 3292 ntBASIC5.26□□□□□ -1.57
Nkx2-2P42586 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Nkx2-2P42586 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
Nkx2-2P42586 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Nkx2-2P42586 Gm44675-201ENSMUST00000208188 2927 ntBASIC5.26□□□□□ -1.57
Nkx2-2P42586 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Nkx2-2P42586 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Nkx2-2P42586 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
Nkx2-2P42586 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Nkx2-2P42586 Gm23294-201ENSMUST00000104150 164 ntBASIC5.26□□□□□ -1.57
Nkx2-2P42586 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC5.26□□□□□ -1.57
Nkx2-2P42586 Gm8761-201ENSMUST00000121507 955 ntBASIC5.26□□□□□ -1.57
Nkx2-2P42586 Gm7309-201ENSMUST00000121670 581 ntBASIC5.26□□□□□ -1.57
Nkx2-2P42586 Gm24692-201ENSMUST00000157761 146 ntBASIC5.26□□□□□ -1.57
Nkx2-2P42586 Gm23116-201ENSMUST00000158481 67 ntBASIC5.26□□□□□ -1.57
Nkx2-2P42586 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Nkx2-2P42586 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC5.26□□□□□ -1.57
Nkx2-2P42586 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC5.26□□□□□ -1.57
Nkx2-2P42586 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 96.8 ms