Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC6.48□□□□□ -1.37
Col2a1P28481 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm16415-201ENSMUST00000080097 489 ntBASIC6.48□□□□□ -1.37
Col2a1P28481 Gm23511-201ENSMUST00000083084 164 ntBASIC6.48□□□□□ -1.37
Col2a1P28481 Mir337-201ENSMUST00000083592 97 ntBASIC6.48□□□□□ -1.37
Col2a1P28481 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Col2a1P28481 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Akt3-201ENSMUST00000019843 1511 ntTSL 5 BASIC6.48□□□□□ -1.37
Col2a1P28481 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Col2a1P28481 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm43022-201ENSMUST00000197067 4268 ntBASIC6.48□□□□□ -1.37
Col2a1P28481 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Col2a1P28481 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
Col2a1P28481 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm42874-201ENSMUST00000198888 1774 ntBASIC6.48□□□□□ -1.37
Col2a1P28481 Med12l-204ENSMUST00000164225 10264 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col2a1P28481 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Col2a1P28481 Gm13593-201ENSMUST00000121329 692 ntBASIC6.47□□□□□ -1.37
Col2a1P28481 Gm15187-201ENSMUST00000122329 264 ntBASIC6.47□□□□□ -1.37
Col2a1P28481 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC6.47□□□□□ -1.37
Col2a1P28481 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col2a1P28481 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Col2a1P28481 Gm29596-201ENSMUST00000185710 385 ntBASIC6.47□□□□□ -1.37
Col2a1P28481 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col2a1P28481 Gm28429-201ENSMUST00000188521 363 ntBASIC6.47□□□□□ -1.37
Col2a1P28481 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Col2a1P28481 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC6.47□□□□□ -1.37
Col2a1P28481 Gm18422-201ENSMUST00000203663 1032 ntBASIC6.47□□□□□ -1.37
Col2a1P28481 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC6.47□□□□□ -1.37
Col2a1P28481 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Col2a1P28481 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col2a1P28481 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Col2a1P28481 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Col2a1P28481 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Col2a1P28481 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC6.47□□□□□ -1.37
Col2a1P28481 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC6.47□□□□□ -1.37
Col2a1P28481 Gm14367-201ENSMUST00000119214 1497 ntBASIC6.47□□□□□ -1.37
Col2a1P28481 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Col2a1P28481 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Col2a1P28481 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Col2a1P28481 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Col2a1P28481 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Col2a1P28481 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Col2a1P28481 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Col2a1P28481 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Col2a1P28481 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col2a1P28481 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col2a1P28481 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col2a1P28481 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC6.47□□□□□ -1.37
Col2a1P28481 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC6.47□□□□□ -1.37
Col2a1P28481 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Col2a1P28481 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Col2a1P28481 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col2a1P28481 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
Col2a1P28481 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC6.47□□□□□ -1.37
Col2a1P28481 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col2a1P28481 Clcn3-202ENSMUST00000056508 5684 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col2a1P28481 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col2a1P28481 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Col2a1P28481 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Col2a1P28481 Gm6305-201ENSMUST00000121027 1012 ntBASIC6.47□□□□□ -1.37
Col2a1P28481 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Col2a1P28481 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC6.47□□□□□ -1.37
Col2a1P28481 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC6.47□□□□□ -1.37
Col2a1P28481 Gm27148-201ENSMUST00000185086 160 ntBASIC6.47□□□□□ -1.37
Col2a1P28481 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC6.47□□□□□ -1.37
Col2a1P28481 Gm29474-201ENSMUST00000187688 379 ntBASIC6.47□□□□□ -1.37
Col2a1P28481 Gm29072-201ENSMUST00000191149 678 ntBASIC6.47□□□□□ -1.37
Col2a1P28481 Gm2367-201ENSMUST00000192374 472 ntBASIC6.47□□□□□ -1.37
Col2a1P28481 Gm37436-201ENSMUST00000193842 1085 ntBASIC6.47□□□□□ -1.37
Col2a1P28481 Gm29755-201ENSMUST00000196976 948 ntBASIC6.47□□□□□ -1.37
Col2a1P28481 Gm42540-201ENSMUST00000200319 2008 ntBASIC6.47□□□□□ -1.37
Col2a1P28481 Zfp626-202ENSMUST00000205671 5329 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col2a1P28481 Gm10610-203ENSMUST00000208877 1206 ntTSL 5 BASIC6.47□□□□□ -1.37
Col2a1P28481 Gm33601-201ENSMUST00000210001 961 ntBASIC6.47□□□□□ -1.37
Col2a1P28481 AC151971.3-201ENSMUST00000214694 404 ntBASIC6.47□□□□□ -1.37
Col2a1P28481 AC134537.2-201ENSMUST00000217770 575 ntBASIC6.47□□□□□ -1.37
Col2a1P28481 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC6.47□□□□□ -1.37
Col2a1P28481 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col2a1P28481 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col2a1P28481 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Col2a1P28481 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC6.47□□□□□ -1.37
Col2a1P28481 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Col2a1P28481 Mir133b-201ENSMUST00000083546 119 ntBASIC6.47□□□□□ -1.37
Col2a1P28481 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
Col2a1P28481 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC6.46□□□□□ -1.37
Col2a1P28481 AC122024.1-201ENSMUST00000219276 4850 ntBASIC6.46□□□□□ -1.37
Col2a1P28481 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms