Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm18559-201ENSMUST00000208249 604 ntBASIC6.71□□□□□ -1.34
Trim39Q9ESN2 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC6.71□□□□□ -1.34
Trim39Q9ESN2 Gm7624-201ENSMUST00000209702 435 ntBASIC6.71□□□□□ -1.34
Trim39Q9ESN2 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Trim39Q9ESN2 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC6.71□□□□□ -1.34
Trim39Q9ESN2 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Trim39Q9ESN2 Ap3m1-208ENSMUST00000224016 764 ntBASIC6.71□□□□□ -1.34
Trim39Q9ESN2 AC158531.2-201ENSMUST00000224264 473 ntBASIC6.71□□□□□ -1.34
Trim39Q9ESN2 AC162183.1-201ENSMUST00000224843 472 ntBASIC6.71□□□□□ -1.34
Trim39Q9ESN2 AC163038.4-201ENSMUST00000224942 474 ntBASIC6.71□□□□□ -1.34
Trim39Q9ESN2 Ifitm5-201ENSMUST00000026562 765 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Trim39Q9ESN2 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Trim39Q9ESN2 Gm5250-201ENSMUST00000059065 321 ntBASIC6.71□□□□□ -1.34
Trim39Q9ESN2 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Trim39Q9ESN2 Rps6-ps1-201ENSMUST00000074205 750 ntBASIC6.71□□□□□ -1.34
Trim39Q9ESN2 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Trim39Q9ESN2 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Trim39Q9ESN2 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Trim39Q9ESN2 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Trim39Q9ESN2 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Trim39Q9ESN2 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC6.71□□□□□ -1.34
Trim39Q9ESN2 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Trim39Q9ESN2 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Trim39Q9ESN2 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Trim39Q9ESN2 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Trim39Q9ESN2 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Trim39Q9ESN2 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
Trim39Q9ESN2 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Trim39Q9ESN2 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Trim39Q9ESN2 AC147639.2-202ENSMUST00000224834 1545 ntBASIC6.71□□□□□ -1.34
Trim39Q9ESN2 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Gm37470-201ENSMUST00000193378 2798 ntBASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Fam49a-205ENSMUST00000223061 1782 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC6.7□□□□□ -1.34
Trim39Q9ESN2 AC129308.1-201ENSMUST00000223800 2309 ntBASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Gm7562-201ENSMUST00000210502 2537 ntBASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Igkv8-30-201ENSMUST00000103378 368 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Gm7146-201ENSMUST00000116079 739 ntBASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Gm13768-201ENSMUST00000116469 929 ntBASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Gm14891-201ENSMUST00000117378 596 ntBASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Gm11843-201ENSMUST00000118984 425 ntBASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Gm9078-201ENSMUST00000119126 617 ntBASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Gm12331-201ENSMUST00000119927 622 ntBASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Dnase1-202ENSMUST00000120009 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Gm14530-201ENSMUST00000122391 333 ntBASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Gm22434-201ENSMUST00000158549 122 ntBASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Gm18867-201ENSMUST00000198022 1179 ntBASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Gm42965-201ENSMUST00000201254 250 ntBASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Klk1b2-ps-201ENSMUST00000206099 786 ntBASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Gm8911-201ENSMUST00000213986 652 ntBASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Gm7392-201ENSMUST00000217815 345 ntBASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Gm5649-201ENSMUST00000217918 951 ntBASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC6.7□□□□□ -1.34
Trim39Q9ESN2 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Gm10264-201ENSMUST00000220589 429 ntBASIC6.7□□□□□ -1.34
Trim39Q9ESN2 7420701I03Rik-201ENSMUST00000222157 737 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trim39Q9ESN2 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Gm2139-201ENSMUST00000222569 1075 ntBASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trim39Q9ESN2 CT030135.1-201ENSMUST00000223760 570 ntBASIC6.7□□□□□ -1.34
Trim39Q9ESN2 AC132590.1-201ENSMUST00000224374 1164 ntBASIC6.7□□□□□ -1.34
Trim39Q9ESN2 AC131747.1-201ENSMUST00000226159 793 ntBASIC6.7□□□□□ -1.34
Trim39Q9ESN2 AC170810.3-201ENSMUST00000226177 374 ntBASIC6.7□□□□□ -1.34
Trim39Q9ESN2 AC166344.2-201ENSMUST00000226747 374 ntBASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Cldn10-202ENSMUST00000071546 1031 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Rps12-ps3-201ENSMUST00000086764 494 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Olfr676-201ENSMUST00000098162 954 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Trim39Q9ESN2 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Trim39Q9ESN2 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Gm37761-201ENSMUST00000194989 2098 ntBASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trim39Q9ESN2 Gm9314-201ENSMUST00000199881 1528 ntBASIC6.7□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms