Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Mir6481-201ENSMUST00000184617 110 ntBASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Gm32175-201ENSMUST00000193641 346 ntBASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Gm37637-201ENSMUST00000195540 1256 ntBASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Gm3511-201ENSMUST00000199823 204 ntBASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Gm2975-201ENSMUST00000209710 820 ntBASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC7.81□□□□□ -1.16
Trim47Q8C0E3 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Trim47Q8C0E3 AC152394.1-201ENSMUST00000227360 1086 ntBASIC7.81□□□□□ -1.16
Trim47Q8C0E3 AC122035.2-201ENSMUST00000228698 462 ntBASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Gm25403-201ENSMUST00000082971 143 ntBASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Olfr669-203ENSMUST00000214260 2336 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Sla-202ENSMUST00000164163 2952 ntAPPRIS P3 TSL 5 BASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Malat1-201ENSMUST00000172812 6983 ntBASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Trim47Q8C0E3 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Gm42930-201ENSMUST00000200872 3260 ntBASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC7.81□□□□□ -1.16
Trim47Q8C0E3 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Trim47Q8C0E3 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim47Q8C0E3 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC7.8□□□□□ -1.16
Trim47Q8C0E3 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim47Q8C0E3 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC7.8□□□□□ -1.16
Trim47Q8C0E3 Gm45174-201ENSMUST00000208884 3065 ntBASIC7.8□□□□□ -1.16
Trim47Q8C0E3 Gm37653-201ENSMUST00000195401 3578 ntBASIC7.8□□□□□ -1.16
Trim47Q8C0E3 Gm28395-201ENSMUST00000187794 2168 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim47Q8C0E3 Gm28571-201ENSMUST00000188922 2168 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim47Q8C0E3 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim47Q8C0E3 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim47Q8C0E3 Rdx-203ENSMUST00000163153 4131 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim47Q8C0E3 Fchsd2-201ENSMUST00000032931 4453 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim47Q8C0E3 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim47Q8C0E3 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim47Q8C0E3 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim47Q8C0E3 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim47Q8C0E3 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim47Q8C0E3 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim47Q8C0E3 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC7.8□□□□□ -1.16
Trim47Q8C0E3 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC7.8□□□□□ -1.16
Trim47Q8C0E3 Gm24756-201ENSMUST00000177002 96 ntBASIC7.8□□□□□ -1.16
Trim47Q8C0E3 Mir8105-201ENSMUST00000184718 89 ntBASIC7.8□□□□□ -1.16
Trim47Q8C0E3 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC7.8□□□□□ -1.16
Trim47Q8C0E3 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC7.8□□□□□ -1.16
Trim47Q8C0E3 Gm38030-201ENSMUST00000192376 475 ntBASIC7.8□□□□□ -1.16
Trim47Q8C0E3 Gm43546-201ENSMUST00000196721 943 ntBASIC7.8□□□□□ -1.16
Trim47Q8C0E3 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim47Q8C0E3 Gm18867-201ENSMUST00000198022 1179 ntBASIC7.8□□□□□ -1.16
Trim47Q8C0E3 Gm42713-201ENSMUST00000202709 945 ntBASIC7.8□□□□□ -1.16
Trim47Q8C0E3 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim47Q8C0E3 Gm45136-201ENSMUST00000205793 943 ntBASIC7.8□□□□□ -1.16
Trim47Q8C0E3 Gm44927-201ENSMUST00000207573 716 ntBASIC7.8□□□□□ -1.16
Trim47Q8C0E3 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim47Q8C0E3 Gm45857-201ENSMUST00000212207 356 ntBASIC7.8□□□□□ -1.16
Trim47Q8C0E3 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC7.8□□□□□ -1.16
Trim47Q8C0E3 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC7.8□□□□□ -1.16
Trim47Q8C0E3 AC155270.1-202ENSMUST00000221503 352 ntBASIC7.8□□□□□ -1.16
Trim47Q8C0E3 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim47Q8C0E3 AC160114.2-201ENSMUST00000223021 300 ntBASIC7.8□□□□□ -1.16
Trim47Q8C0E3 AC161275.1-201ENSMUST00000224668 208 ntBASIC7.8□□□□□ -1.16
Trim47Q8C0E3 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Trim47Q8C0E3 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim47Q8C0E3 Gm23054-201ENSMUST00000082804 162 ntBASIC7.8□□□□□ -1.16
Trim47Q8C0E3 Gm24451-201ENSMUST00000083353 133 ntBASIC7.8□□□□□ -1.16
Trim47Q8C0E3 Gm37877-201ENSMUST00000191630 2709 ntBASIC7.8□□□□□ -1.16
Trim47Q8C0E3 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim47Q8C0E3 AC158537.1-201ENSMUST00000224637 1711 ntBASIC7.8□□□□□ -1.16
Trim47Q8C0E3 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim47Q8C0E3 Gm18248-201ENSMUST00000191164 1846 ntBASIC7.8□□□□□ -1.16
Trim47Q8C0E3 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim47Q8C0E3 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim47Q8C0E3 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Trim47Q8C0E3 Il5ra-203ENSMUST00000205004 2271 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim47Q8C0E3 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim47Q8C0E3 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Trim47Q8C0E3 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim47Q8C0E3 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Trim47Q8C0E3 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC7.79□□□□□ -1.16
Trim47Q8C0E3 Gm10258-201ENSMUST00000091270 2123 ntBASIC7.79□□□□□ -1.16
Trim47Q8C0E3 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC7.79□□□□□ -1.16
Trim47Q8C0E3 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trim47Q8C0E3 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim47Q8C0E3 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim47Q8C0E3 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trim47Q8C0E3 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Trim47Q8C0E3 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trim47Q8C0E3 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms