Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Col17a1Q07563 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Col17a1Q07563 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC9.02□□□□□ -0.97
Col17a1Q07563 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Col17a1Q07563 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Col17a1Q07563 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Col17a1Q07563 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC9.02□□□□□ -0.97
Col17a1Q07563 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC9.02□□□□□ -0.97
Col17a1Q07563 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC9.02□□□□□ -0.97
Col17a1Q07563 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC9.02□□□□□ -0.97
Col17a1Q07563 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC9.02□□□□□ -0.97
Col17a1Q07563 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC9.02□□□□□ -0.97
Col17a1Q07563 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC9.02□□□□□ -0.97
Col17a1Q07563 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC9.02□□□□□ -0.97
Col17a1Q07563 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC9.02□□□□□ -0.97
Col17a1Q07563 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC9.02□□□□□ -0.97
Col17a1Q07563 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Col17a1Q07563 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Col17a1Q07563 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Col17a1Q07563 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Col17a1Q07563 Gm43019-201ENSMUST00000196948 2863 ntBASIC9.02□□□□□ -0.97
Col17a1Q07563 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Col17a1Q07563 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
Col17a1Q07563 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Col17a1Q07563 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Col17a1Q07563 Gm23274-201ENSMUST00000104056 130 ntBASIC9.02□□□□□ -0.97
Col17a1Q07563 Gm13137-201ENSMUST00000118035 345 ntBASIC9.02□□□□□ -0.97
Col17a1Q07563 Gm23211-201ENSMUST00000122717 308 ntBASIC9.02□□□□□ -0.97
Col17a1Q07563 Gm3362-201ENSMUST00000148102 466 ntBASIC9.02□□□□□ -0.97
Col17a1Q07563 Gm24444-201ENSMUST00000157244 308 ntBASIC9.02□□□□□ -0.97
Col17a1Q07563 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC9.02□□□□□ -0.97
Col17a1Q07563 Gm22395-201ENSMUST00000177427 96 ntBASIC9.02□□□□□ -0.97
Col17a1Q07563 Gm8264-201ENSMUST00000217801 465 ntBASIC9.02□□□□□ -0.97
Col17a1Q07563 Gm8158-201ENSMUST00000219220 465 ntBASIC9.02□□□□□ -0.97
Col17a1Q07563 Gm8112-201ENSMUST00000219637 465 ntBASIC9.02□□□□□ -0.97
Col17a1Q07563 Zmym2-202ENSMUST00000223669 1281 ntBASIC9.02□□□□□ -0.97
Col17a1Q07563 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Col17a1Q07563 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Col17a1Q07563 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Col17a1Q07563 Akap2-202ENSMUST00000098064 7172 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Col17a1Q07563 Gm16638-202ENSMUST00000208892 8508 ntTSL 5 BASIC9.01□□□□□ -0.97
Col17a1Q07563 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Col17a1Q07563 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Col17a1Q07563 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC9.01□□□□□ -0.97
Col17a1Q07563 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Col17a1Q07563 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Col17a1Q07563 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC9.01□□□□□ -0.97
Col17a1Q07563 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Col17a1Q07563 Uvssa-204ENSMUST00000202816 7165 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Col17a1Q07563 Specc1-207ENSMUST00000201364 4955 ntAPPRIS P4 TSL 5 BASIC9.01□□□□□ -0.97
Col17a1Q07563 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Col17a1Q07563 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC9.01□□□□□ -0.97
Col17a1Q07563 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Col17a1Q07563 Tenm1-201ENSMUST00000016294 8365 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Col17a1Q07563 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Col17a1Q07563 Mir708-201ENSMUST00000102189 109 ntBASIC9.01□□□□□ -0.97
Col17a1Q07563 Mir669o-201ENSMUST00000103898 96 ntBASIC9.01□□□□□ -0.97
Col17a1Q07563 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC9.01□□□□□ -0.97
Col17a1Q07563 Gm14769-201ENSMUST00000118590 432 ntBASIC9.01□□□□□ -0.97
Col17a1Q07563 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC9.01□□□□□ -0.97
Col17a1Q07563 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Col17a1Q07563 Gm24217-201ENSMUST00000158260 133 ntBASIC9.01□□□□□ -0.97
Col17a1Q07563 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC9.01□□□□□ -0.97
Col17a1Q07563 Gm38217-201ENSMUST00000194358 910 ntBASIC9.01□□□□□ -0.97
Col17a1Q07563 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC9.01□□□□□ -0.97
Col17a1Q07563 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC9.01□□□□□ -0.97
Col17a1Q07563 AC154450.1-201ENSMUST00000220911 485 ntBASIC9.01□□□□□ -0.97
Col17a1Q07563 Gm5215-201ENSMUST00000054380 405 ntBASIC9.01□□□□□ -0.97
Col17a1Q07563 Mir193a-201ENSMUST00000083461 66 ntBASIC9.01□□□□□ -0.97
Col17a1Q07563 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Col17a1Q07563 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Col17a1Q07563 Olfr1340-202ENSMUST00000213436 1948 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Col17a1Q07563 Muc5ac-203ENSMUST00000163321 8505 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Col17a1Q07563 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Col17a1Q07563 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC9□□□□□ -0.97
Col17a1Q07563 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC9□□□□□ -0.97
Col17a1Q07563 Gm6011-201ENSMUST00000211736 1796 ntBASIC9□□□□□ -0.97
Col17a1Q07563 Vma21-203ENSMUST00000114577 4652 ntTSL 3 BASIC9□□□□□ -0.97
Col17a1Q07563 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC9□□□□□ -0.97
Col17a1Q07563 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Col17a1Q07563 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Col17a1Q07563 Arfgef1-201ENSMUST00000088615 6978 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Col17a1Q07563 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Col17a1Q07563 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Col17a1Q07563 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Col17a1Q07563 Zfp831-201ENSMUST00000059452 9807 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Col17a1Q07563 Gm43857-201ENSMUST00000200343 3079 ntBASIC9□□□□□ -0.97
Col17a1Q07563 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Col17a1Q07563 Gm37143-201ENSMUST00000195180 3259 ntBASIC9□□□□□ -0.97
Col17a1Q07563 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC9□□□□□ -0.97
Col17a1Q07563 Gm12073-201ENSMUST00000117382 524 ntBASIC9□□□□□ -0.97
Col17a1Q07563 Gm4234-201ENSMUST00000119747 714 ntBASIC9□□□□□ -0.97
Col17a1Q07563 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC9□□□□□ -0.97
Col17a1Q07563 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Col17a1Q07563 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC9□□□□□ -0.97
Col17a1Q07563 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC9□□□□□ -0.97
Col17a1Q07563 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC9□□□□□ -0.97
Col17a1Q07563 Gm18407-201ENSMUST00000192126 790 ntBASIC9□□□□□ -0.97
Col17a1Q07563 Gm37213-201ENSMUST00000193077 586 ntBASIC9□□□□□ -0.97
Col17a1Q07563 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC9□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms