Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Lingo2-202ENSMUST00000098151 2781 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Col1a1P11087 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Col1a1P11087 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Col1a1P11087 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col1a1P11087 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col1a1P11087 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC6.73□□□□□ -1.33
Col1a1P11087 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col1a1P11087 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC6.73□□□□□ -1.33
Col1a1P11087 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC6.73□□□□□ -1.33
Col1a1P11087 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Col1a1P11087 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC6.73□□□□□ -1.33
Col1a1P11087 Gm25430-201ENSMUST00000157614 289 ntBASIC6.73□□□□□ -1.33
Col1a1P11087 Gm27541-201ENSMUST00000184078 122 ntBASIC6.73□□□□□ -1.33
Col1a1P11087 Gm28683-201ENSMUST00000187134 615 ntBASIC6.73□□□□□ -1.33
Col1a1P11087 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC6.73□□□□□ -1.33
Col1a1P11087 Gm28840-205ENSMUST00000189320 615 ntBASIC6.73□□□□□ -1.33
Col1a1P11087 Gm28835-203ENSMUST00000190062 615 ntBASIC6.73□□□□□ -1.33
Col1a1P11087 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC6.73□□□□□ -1.33
Col1a1P11087 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
Col1a1P11087 Gm5457-201ENSMUST00000022260 333 ntBASIC6.73□□□□□ -1.33
Col1a1P11087 Gm26814-201ENSMUST00000181178 4149 ntBASIC6.72□□□□□ -1.33
Col1a1P11087 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Col1a1P11087 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Col1a1P11087 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col1a1P11087 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Col1a1P11087 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Col1a1P11087 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
Col1a1P11087 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Col1a1P11087 Gm38276-201ENSMUST00000192446 1343 ntBASIC6.72□□□□□ -1.33
Col1a1P11087 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC6.72□□□□□ -1.33
Col1a1P11087 Gm37738-201ENSMUST00000192396 4716 ntBASIC6.72□□□□□ -1.33
Col1a1P11087 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC6.72□□□□□ -1.33
Col1a1P11087 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Col1a1P11087 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Col1a1P11087 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col1a1P11087 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col1a1P11087 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col1a1P11087 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC6.72□□□□□ -1.33
Col1a1P11087 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC6.72□□□□□ -1.33
Col1a1P11087 Gm28385-201ENSMUST00000185671 292 ntBASIC6.72□□□□□ -1.33
Col1a1P11087 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Col1a1P11087 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Col1a1P11087 CT030182.2-201ENSMUST00000223569 620 ntBASIC6.72□□□□□ -1.33
Col1a1P11087 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col1a1P11087 Gm37482-201ENSMUST00000194899 2791 ntBASIC6.72□□□□□ -1.33
Col1a1P11087 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col1a1P11087 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Col1a1P11087 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC6.71□□□□□ -1.33
Col1a1P11087 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Col1a1P11087 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Col1a1P11087 AC139758.3-201ENSMUST00000226853 2704 ntBASIC6.71□□□□□ -1.33
Col1a1P11087 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Col1a1P11087 A530017D24Rik-201ENSMUST00000101077 2315 ntTSL 5 BASIC6.71□□□□□ -1.33
Col1a1P11087 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col1a1P11087 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Col1a1P11087 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Col1a1P11087 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Col1a1P11087 Gm42975-201ENSMUST00000200612 1491 ntBASIC6.71□□□□□ -1.34
Col1a1P11087 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Col1a1P11087 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC6.71□□□□□ -1.34
Col1a1P11087 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC6.71□□□□□ -1.34
Col1a1P11087 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
Col1a1P11087 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
Col1a1P11087 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Col1a1P11087 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC6.71□□□□□ -1.34
Col1a1P11087 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC6.71□□□□□ -1.34
Col1a1P11087 Gm5405-201ENSMUST00000120478 609 ntBASIC6.71□□□□□ -1.34
Col1a1P11087 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC6.71□□□□□ -1.34
Col1a1P11087 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC6.71□□□□□ -1.34
Col1a1P11087 Gm24103-201ENSMUST00000174930 77 ntBASIC6.71□□□□□ -1.34
Col1a1P11087 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC6.71□□□□□ -1.34
Col1a1P11087 Gm9499-201ENSMUST00000180888 964 ntBASIC6.71□□□□□ -1.34
Col1a1P11087 Gm37421-201ENSMUST00000193088 132 ntBASIC6.71□□□□□ -1.34
Col1a1P11087 Gm37716-201ENSMUST00000193553 947 ntBASIC6.71□□□□□ -1.34
Col1a1P11087 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Col1a1P11087 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Col1a1P11087 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC6.71□□□□□ -1.34
Col1a1P11087 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
Col1a1P11087 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Col1a1P11087 Mir30b-201ENSMUST00000083542 96 ntBASIC6.71□□□□□ -1.34
Col1a1P11087 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
Col1a1P11087 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Col1a1P11087 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Col1a1P11087 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col1a1P11087 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Col1a1P11087 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Col1a1P11087 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Col1a1P11087 3110043O21Rik-201ENSMUST00000084724 3413 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Col1a1P11087 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Col1a1P11087 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Col1a1P11087 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC6.7□□□□□ -1.34
Col1a1P11087 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col1a1P11087 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Col1a1P11087 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col1a1P11087 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC6.7□□□□□ -1.34
Col1a1P11087 Gm36947-201ENSMUST00000194709 2249 ntBASIC6.7□□□□□ -1.34
Col1a1P11087 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col1a1P11087 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Col1a1P11087 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC6.7□□□□□ -1.34
Col1a1P11087 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 108.3 ms