Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Lsm1Q8VC85 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Lsm1Q8VC85 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Lsm1Q8VC85 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
Lsm1Q8VC85 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Lsm1Q8VC85 AC154612.1-202ENSMUST00000224806 1725 ntBASIC5.56□□□□□ -1.52
Lsm1Q8VC85 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Lsm1Q8VC85 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC5.56□□□□□ -1.52
Lsm1Q8VC85 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Lsm1Q8VC85 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Lsm1Q8VC85 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Lsm1Q8VC85 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Lsm1Q8VC85 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Lsm1Q8VC85 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Lsm1Q8VC85 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Lsm1Q8VC85 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Lsm1Q8VC85 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Lsm1Q8VC85 Gm37930-201ENSMUST00000194308 1886 ntBASIC5.56□□□□□ -1.52
Lsm1Q8VC85 Gm4011-201ENSMUST00000174657 2555 ntBASIC5.56□□□□□ -1.52
Lsm1Q8VC85 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Lsm1Q8VC85 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Lsm1Q8VC85 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
Lsm1Q8VC85 Gm5512-201ENSMUST00000218013 1353 ntBASIC5.55□□□□□ -1.52
Lsm1Q8VC85 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Lsm1Q8VC85 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Lsm1Q8VC85 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC5.55□□□□□ -1.52
Lsm1Q8VC85 Gm37628-201ENSMUST00000194644 5440 ntBASIC5.55□□□□□ -1.52
Lsm1Q8VC85 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Lsm1Q8VC85 AC112972.2-201ENSMUST00000228702 2210 ntBASIC5.55□□□□□ -1.52
Lsm1Q8VC85 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Lsm1Q8VC85 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Lsm1Q8VC85 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC5.55□□□□□ -1.52
Lsm1Q8VC85 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Lsm1Q8VC85 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Lsm1Q8VC85 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC5.55□□□□□ -1.52
Lsm1Q8VC85 Gm12683-201ENSMUST00000117528 415 ntBASIC5.55□□□□□ -1.52
Lsm1Q8VC85 Gm14783-201ENSMUST00000118900 663 ntBASIC5.55□□□□□ -1.52
Lsm1Q8VC85 Gm13121-201ENSMUST00000120637 632 ntBASIC5.55□□□□□ -1.52
Lsm1Q8VC85 Gm8317-201ENSMUST00000121261 471 ntBASIC5.55□□□□□ -1.52
Lsm1Q8VC85 Gm26353-201ENSMUST00000158224 255 ntBASIC5.55□□□□□ -1.52
Lsm1Q8VC85 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC5.55□□□□□ -1.52
Lsm1Q8VC85 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC5.55□□□□□ -1.52
Lsm1Q8VC85 Gm18006-201ENSMUST00000177411 662 ntBASIC5.55□□□□□ -1.52
Lsm1Q8VC85 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Lsm1Q8VC85 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Lsm1Q8VC85 Gm27998-201ENSMUST00000184902 361 ntBASIC5.55□□□□□ -1.52
Lsm1Q8VC85 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
Lsm1Q8VC85 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Lsm1Q8VC85 Gm44251-201ENSMUST00000204963 442 ntBASIC5.55□□□□□ -1.52
Lsm1Q8VC85 Gm5735-201ENSMUST00000207053 167 ntBASIC5.55□□□□□ -1.52
Lsm1Q8VC85 AC174082.2-201ENSMUST00000222094 543 ntBASIC5.55□□□□□ -1.52
Lsm1Q8VC85 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC5.55□□□□□ -1.52
Lsm1Q8VC85 AC161383.1-201ENSMUST00000227356 527 ntBASIC5.55□□□□□ -1.52
Lsm1Q8VC85 AC154484.2-201ENSMUST00000228359 818 ntBASIC5.55□□□□□ -1.52
Lsm1Q8VC85 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
Lsm1Q8VC85 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Lsm1Q8VC85 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Lsm1Q8VC85 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Lsm1Q8VC85 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Lsm1Q8VC85 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Lsm1Q8VC85 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC5.55□□□□□ -1.52
Lsm1Q8VC85 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC5.55□□□□□ -1.52
Lsm1Q8VC85 AC156569.1-201ENSMUST00000222020 3841 ntBASIC5.55□□□□□ -1.52
Lsm1Q8VC85 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
Lsm1Q8VC85 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Lsm1Q8VC85 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Lsm1Q8VC85 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC5.54□□□□□ -1.52
Lsm1Q8VC85 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Lsm1Q8VC85 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Lsm1Q8VC85 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Lsm1Q8VC85 Gm38198-201ENSMUST00000191772 3581 ntBASIC5.54□□□□□ -1.52
Lsm1Q8VC85 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Lsm1Q8VC85 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC5.54□□□□□ -1.52
Lsm1Q8VC85 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Lsm1Q8VC85 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Lsm1Q8VC85 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC5.54□□□□□ -1.52
Lsm1Q8VC85 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC5.54□□□□□ -1.52
Lsm1Q8VC85 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Lsm1Q8VC85 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Lsm1Q8VC85 Gm14531-201ENSMUST00000120845 285 ntBASIC5.54□□□□□ -1.52
Lsm1Q8VC85 Gm13899-201ENSMUST00000121519 1255 ntBASIC5.54□□□□□ -1.52
Lsm1Q8VC85 Gm11879-201ENSMUST00000121885 702 ntBASIC5.54□□□□□ -1.52
Lsm1Q8VC85 Gm13669-201ENSMUST00000122366 457 ntBASIC5.54□□□□□ -1.52
Lsm1Q8VC85 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Lsm1Q8VC85 Gm24767-201ENSMUST00000158509 95 ntBASIC5.54□□□□□ -1.52
Lsm1Q8VC85 Gm20545-201ENSMUST00000174739 210 ntBASIC5.54□□□□□ -1.52
Lsm1Q8VC85 Gm25065-201ENSMUST00000177914 132 ntBASIC5.54□□□□□ -1.52
Lsm1Q8VC85 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC5.54□□□□□ -1.52
Lsm1Q8VC85 Gm25891-201ENSMUST00000180050 132 ntBASIC5.54□□□□□ -1.52
Lsm1Q8VC85 Vis1-201ENSMUST00000183957 201 ntBASIC5.54□□□□□ -1.52
Lsm1Q8VC85 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC5.54□□□□□ -1.52
Lsm1Q8VC85 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC5.54□□□□□ -1.52
Lsm1Q8VC85 Gm37581-201ENSMUST00000192371 988 ntBASIC5.54□□□□□ -1.52
Lsm1Q8VC85 Gm6631-201ENSMUST00000193699 559 ntBASIC5.54□□□□□ -1.52
Lsm1Q8VC85 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC5.54□□□□□ -1.52
Lsm1Q8VC85 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Lsm1Q8VC85 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC5.54□□□□□ -1.52
Lsm1Q8VC85 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC5.54□□□□□ -1.52
Lsm1Q8VC85 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Lsm1Q8VC85 AC131187.2-201ENSMUST00000223936 994 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms