Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a6Q8C6K9 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 Gm11990-201ENSMUST00000121505 897 ntBASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 Gm23211-201ENSMUST00000122717 308 ntBASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 Gm20545-201ENSMUST00000174739 210 ntBASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 AC079644.3-201ENSMUST00000222452 357 ntBASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 Gm18247-201ENSMUST00000222937 601 ntBASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 AC154636.1-201ENSMUST00000223226 126 ntBASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 Gm19131-202ENSMUST00000203464 3208 ntBASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 Clcn3-202ENSMUST00000056508 5684 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 AC158595.1-201ENSMUST00000217989 1435 ntBASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 Gm15660-201ENSMUST00000118997 478 ntBASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 Gm22870-201ENSMUST00000157501 112 ntBASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 Gm18632-201ENSMUST00000222597 2087 ntBASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a6Q8C6K9 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 AC132852.1-201ENSMUST00000214683 2324 ntBASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Gm22778-201ENSMUST00000104090 128 ntBASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Gm23485-201ENSMUST00000104181 155 ntBASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Gm13740-201ENSMUST00000120590 310 ntBASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Gm7609-204ENSMUST00000161424 461 ntBASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Ighv1-35-201ENSMUST00000195265 351 ntBASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 AC164297.2-201ENSMUST00000224388 1508 ntBASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Gm42541-201ENSMUST00000199871 2249 ntBASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Gm8401-201ENSMUST00000120248 1739 ntBASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Gm11908-201ENSMUST00000117755 347 ntBASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Gm9429-201ENSMUST00000117804 868 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms