Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm28589-201ENSMUST00000186991 615 ntBASIC8.05□□□□□ -1.12
Usp47Q8BY87 Gm28936-201ENSMUST00000187153 615 ntBASIC8.05□□□□□ -1.12
Usp47Q8BY87 Gm6137-201ENSMUST00000187552 578 ntBASIC8.05□□□□□ -1.12
Usp47Q8BY87 Gm29121-201ENSMUST00000187611 615 ntBASIC8.05□□□□□ -1.12
Usp47Q8BY87 Gm28243-201ENSMUST00000187801 615 ntBASIC8.05□□□□□ -1.12
Usp47Q8BY87 Gm28844-202ENSMUST00000187977 615 ntBASIC8.05□□□□□ -1.12
Usp47Q8BY87 Gm29058-201ENSMUST00000189510 615 ntBASIC8.05□□□□□ -1.12
Usp47Q8BY87 Gm29624-201ENSMUST00000190018 615 ntBASIC8.05□□□□□ -1.12
Usp47Q8BY87 Gm28780-201ENSMUST00000190223 615 ntBASIC8.05□□□□□ -1.12
Usp47Q8BY87 Gm28969-211ENSMUST00000190992 615 ntBASIC8.05□□□□□ -1.12
Usp47Q8BY87 Gm28990-207ENSMUST00000191219 615 ntBASIC8.05□□□□□ -1.12
Usp47Q8BY87 Gm36468-201ENSMUST00000192119 615 ntBASIC8.05□□□□□ -1.12
Usp47Q8BY87 Gm31572-201ENSMUST00000193341 615 ntBASIC8.05□□□□□ -1.12
Usp47Q8BY87 Gm30175-201ENSMUST00000194173 615 ntBASIC8.05□□□□□ -1.12
Usp47Q8BY87 Gm30858-201ENSMUST00000195516 615 ntBASIC8.05□□□□□ -1.12
Usp47Q8BY87 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC8.05□□□□□ -1.12
Usp47Q8BY87 AC154583.1-201ENSMUST00000224788 655 ntBASIC8.05□□□□□ -1.12
Usp47Q8BY87 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Usp47Q8BY87 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Usp47Q8BY87 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Usp47Q8BY87 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC8.05□□□□□ -1.12
Usp47Q8BY87 AC121942.1-201ENSMUST00000224459 2891 ntBASIC8.05□□□□□ -1.12
Usp47Q8BY87 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Usp47Q8BY87 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC8.05□□□□□ -1.12
Usp47Q8BY87 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC8.05□□□□□ -1.12
Usp47Q8BY87 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC8.05□□□□□ -1.12
Usp47Q8BY87 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Usp47Q8BY87 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Usp47Q8BY87 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Usp47Q8BY87 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Usp47Q8BY87 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC8.04□□□□□ -1.12
Usp47Q8BY87 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Usp47Q8BY87 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Usp47Q8BY87 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Usp47Q8BY87 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Usp47Q8BY87 Gm11270-201ENSMUST00000117685 471 ntBASIC8.04□□□□□ -1.12
Usp47Q8BY87 Gm4989-201ENSMUST00000118711 749 ntBASIC8.04□□□□□ -1.12
Usp47Q8BY87 Gm6067-201ENSMUST00000121648 491 ntBASIC8.04□□□□□ -1.12
Usp47Q8BY87 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Usp47Q8BY87 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC8.04□□□□□ -1.12
Usp47Q8BY87 Gm28353-201ENSMUST00000186482 570 ntBASIC8.04□□□□□ -1.12
Usp47Q8BY87 Gm28533-201ENSMUST00000186741 570 ntBASIC8.04□□□□□ -1.12
Usp47Q8BY87 Gm29159-201ENSMUST00000187969 379 ntBASIC8.04□□□□□ -1.12
Usp47Q8BY87 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Usp47Q8BY87 Gm18348-201ENSMUST00000191227 820 ntBASIC8.04□□□□□ -1.12
Usp47Q8BY87 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Usp47Q8BY87 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Usp47Q8BY87 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC8.04□□□□□ -1.12
Usp47Q8BY87 Gm8039-201ENSMUST00000204758 712 ntBASIC8.04□□□□□ -1.12
Usp47Q8BY87 Gm4374-201ENSMUST00000204929 424 ntBASIC8.04□□□□□ -1.12
Usp47Q8BY87 Gm44580-201ENSMUST00000206333 877 ntBASIC8.04□□□□□ -1.12
Usp47Q8BY87 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC8.04□□□□□ -1.12
Usp47Q8BY87 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Usp47Q8BY87 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC8.04□□□□□ -1.12
Usp47Q8BY87 CU024910.1-201ENSMUST00000214310 418 ntBASIC8.04□□□□□ -1.12
Usp47Q8BY87 AC165347.1-201ENSMUST00000224089 1025 ntBASIC8.04□□□□□ -1.12
Usp47Q8BY87 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC8.04□□□□□ -1.12
Usp47Q8BY87 Gm23330-201ENSMUST00000082660 164 ntBASIC8.04□□□□□ -1.12
Usp47Q8BY87 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Usp47Q8BY87 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Usp47Q8BY87 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Usp47Q8BY87 Gm44843-201ENSMUST00000208320 1396 ntBASIC8.04□□□□□ -1.12
Usp47Q8BY87 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC8.04□□□□□ -1.12
Usp47Q8BY87 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Usp47Q8BY87 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC8.04□□□□□ -1.12
Usp47Q8BY87 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Usp47Q8BY87 AC130827.1-201ENSMUST00000220476 3850 ntBASIC8.04□□□□□ -1.12
Usp47Q8BY87 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Usp47Q8BY87 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Usp47Q8BY87 AC132852.1-201ENSMUST00000214683 2324 ntBASIC8.03□□□□□ -1.12
Usp47Q8BY87 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Usp47Q8BY87 AC136019.1-201ENSMUST00000226503 1412 ntBASIC8.03□□□□□ -1.12
Usp47Q8BY87 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Usp47Q8BY87 Gm11481-201ENSMUST00000120069 255 ntBASIC8.03□□□□□ -1.12
Usp47Q8BY87 Mup-ps19-201ENSMUST00000120390 519 ntBASIC8.03□□□□□ -1.12
Usp47Q8BY87 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC8.03□□□□□ -1.12
Usp47Q8BY87 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC8.03□□□□□ -1.12
Usp47Q8BY87 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC8.03□□□□□ -1.12
Usp47Q8BY87 Scarna6-201ENSMUST00000158656 265 ntBASIC8.03□□□□□ -1.12
Usp47Q8BY87 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Usp47Q8BY87 Gm20397-201ENSMUST00000174520 362 ntBASIC8.03□□□□□ -1.12
Usp47Q8BY87 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC8.03□□□□□ -1.12
Usp47Q8BY87 Mir3110-201ENSMUST00000175053 80 ntBASIC8.03□□□□□ -1.12
Usp47Q8BY87 Gm23631-201ENSMUST00000175291 123 ntBASIC8.03□□□□□ -1.12
Usp47Q8BY87 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Usp47Q8BY87 Gm8604-201ENSMUST00000183150 965 ntBASIC8.03□□□□□ -1.12
Usp47Q8BY87 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC8.03□□□□□ -1.12
Usp47Q8BY87 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Usp47Q8BY87 Gm42814-201ENSMUST00000199370 460 ntBASIC8.03□□□□□ -1.12
Usp47Q8BY87 Gm19880-201ENSMUST00000207731 318 ntBASIC8.03□□□□□ -1.12
Usp47Q8BY87 Gm45405-201ENSMUST00000211544 609 ntBASIC8.03□□□□□ -1.12
Usp47Q8BY87 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Usp47Q8BY87 AC110381.1-201ENSMUST00000218987 586 ntBASIC8.03□□□□□ -1.12
Usp47Q8BY87 Gm18940-201ENSMUST00000222518 871 ntBASIC8.03□□□□□ -1.12
Usp47Q8BY87 AC133203.2-201ENSMUST00000226709 464 ntBASIC8.03□□□□□ -1.12
Usp47Q8BY87 Gm44660-201ENSMUST00000207134 2465 ntBASIC8.03□□□□□ -1.12
Usp47Q8BY87 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Usp47Q8BY87 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC8.03□□□□□ -1.12
Usp47Q8BY87 Gm4011-201ENSMUST00000174657 2555 ntBASIC8.03□□□□□ -1.12
Usp47Q8BY87 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 94.3 ms