Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Col18a1P39061 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC7.89□□□□□ -1.15
Col18a1P39061 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC7.89□□□□□ -1.15
Col18a1P39061 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC7.89□□□□□ -1.15
Col18a1P39061 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Col18a1P39061 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Col18a1P39061 Srcap-206ENSMUST00000186954 9345 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Col18a1P39061 Gm38156-201ENSMUST00000194601 2260 ntBASIC7.89□□□□□ -1.15
Col18a1P39061 Olfr1283-202ENSMUST00000204064 1625 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Col18a1P39061 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Col18a1P39061 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Col18a1P39061 Dusp3-202ENSMUST00000107172 4445 ntAPPRIS P1 TSL 3 BASIC7.89□□□□□ -1.15
Col18a1P39061 AC164437.5-201ENSMUST00000227235 4414 ntBASIC7.89□□□□□ -1.15
Col18a1P39061 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC7.89□□□□□ -1.15
Col18a1P39061 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Col18a1P39061 Erc2-201ENSMUST00000090302 6083 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Col18a1P39061 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Col18a1P39061 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC7.89□□□□□ -1.15
Col18a1P39061 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC7.89□□□□□ -1.15
Col18a1P39061 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Col18a1P39061 Tbc1d8b-201ENSMUST00000096313 5094 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Col18a1P39061 Nav2-216ENSMUST00000184945 10665 ntAPPRIS P4 TSL 5 BASIC7.89□□□□□ -1.15
Col18a1P39061 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
Col18a1P39061 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC7.89□□□□□ -1.15
Col18a1P39061 AC126549.1-201ENSMUST00000225044 3687 ntBASIC7.89□□□□□ -1.15
Col18a1P39061 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC7.89□□□□□ -1.15
Col18a1P39061 Gm25227-201ENSMUST00000158204 112 ntBASIC7.89□□□□□ -1.15
Col18a1P39061 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC7.89□□□□□ -1.15
Col18a1P39061 Gm27286-201ENSMUST00000184934 179 ntBASIC7.89□□□□□ -1.15
Col18a1P39061 Gm29124-201ENSMUST00000186576 452 ntBASIC7.89□□□□□ -1.15
Col18a1P39061 Gm33571-201ENSMUST00000193271 657 ntBASIC7.89□□□□□ -1.15
Col18a1P39061 Gm8023-201ENSMUST00000195298 903 ntBASIC7.89□□□□□ -1.15
Col18a1P39061 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Col18a1P39061 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC7.89□□□□□ -1.15
Col18a1P39061 Gm44053-201ENSMUST00000203364 929 ntBASIC7.89□□□□□ -1.15
Col18a1P39061 Gm18791-201ENSMUST00000204611 726 ntBASIC7.89□□□□□ -1.15
Col18a1P39061 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC7.89□□□□□ -1.15
Col18a1P39061 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC7.89□□□□□ -1.15
Col18a1P39061 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC7.89□□□□□ -1.15
Col18a1P39061 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Col18a1P39061 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Col18a1P39061 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Col18a1P39061 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Col18a1P39061 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Col18a1P39061 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Col18a1P39061 Pum1-205ENSMUST00000105992 5058 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Col18a1P39061 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC7.89□□□□□ -1.15
Col18a1P39061 Erc1-201ENSMUST00000032279 8356 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Col18a1P39061 Pcdh15-236ENSMUST00000193174 5936 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Col18a1P39061 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC7.88□□□□□ -1.15
Col18a1P39061 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col18a1P39061 Nup155-201ENSMUST00000163765 6402 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col18a1P39061 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col18a1P39061 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Col18a1P39061 Abca1-201ENSMUST00000030010 10262 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col18a1P39061 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col18a1P39061 Gm4989-201ENSMUST00000118711 749 ntBASIC7.88□□□□□ -1.15
Col18a1P39061 H3f3c-201ENSMUST00000119459 411 ntBASIC7.88□□□□□ -1.15
Col18a1P39061 Gm14485-201ENSMUST00000119489 493 ntBASIC7.88□□□□□ -1.15
Col18a1P39061 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC7.88□□□□□ -1.15
Col18a1P39061 Gm15152-201ENSMUST00000121540 394 ntBASIC7.88□□□□□ -1.15
Col18a1P39061 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC7.88□□□□□ -1.15
Col18a1P39061 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Col18a1P39061 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Col18a1P39061 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Col18a1P39061 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC7.88□□□□□ -1.15
Col18a1P39061 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC7.88□□□□□ -1.15
Col18a1P39061 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Col18a1P39061 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC7.88□□□□□ -1.15
Col18a1P39061 Gm23327-201ENSMUST00000157420 78 ntBASIC7.88□□□□□ -1.15
Col18a1P39061 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Col18a1P39061 Gm20523-201ENSMUST00000174340 1124 ntBASIC7.88□□□□□ -1.15
Col18a1P39061 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC7.88□□□□□ -1.15
Col18a1P39061 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC7.88□□□□□ -1.15
Col18a1P39061 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC7.88□□□□□ -1.15
Col18a1P39061 Gm34224-201ENSMUST00000204606 364 ntBASIC7.88□□□□□ -1.15
Col18a1P39061 Gm45908-201ENSMUST00000212977 1177 ntBASIC7.88□□□□□ -1.15
Col18a1P39061 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Col18a1P39061 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC7.88□□□□□ -1.15
Col18a1P39061 AC159293.2-201ENSMUST00000222289 424 ntBASIC7.88□□□□□ -1.15
Col18a1P39061 AC153153.2-201ENSMUST00000223572 411 ntBASIC7.88□□□□□ -1.15
Col18a1P39061 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Col18a1P39061 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Col18a1P39061 Mir17-201ENSMUST00000083574 84 ntBASIC7.88□□□□□ -1.15
Col18a1P39061 Gm38276-201ENSMUST00000192446 1343 ntBASIC7.88□□□□□ -1.15
Col18a1P39061 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Col18a1P39061 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col18a1P39061 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Col18a1P39061 Itpr1-201ENSMUST00000032192 9870 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col18a1P39061 Zcchc6-201ENSMUST00000071703 5869 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col18a1P39061 Zfp180-201ENSMUST00000068975 3901 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col18a1P39061 Gm37633-201ENSMUST00000192858 2700 ntBASIC7.87□□□□□ -1.15
Col18a1P39061 Gm38661-201ENSMUST00000216555 5814 ntTSL 5 BASIC7.87□□□□□ -1.15
Col18a1P39061 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Col18a1P39061 Med1-203ENSMUST00000107545 8024 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col18a1P39061 Sbf2-205ENSMUST00000164759 7090 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
Col18a1P39061 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC7.87□□□□□ -1.15
Col18a1P39061 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC7.87□□□□□ -1.15
Col18a1P39061 Gm11677-201ENSMUST00000121349 977 ntBASIC7.87□□□□□ -1.15
Col18a1P39061 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms