Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
P20040 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
P20040 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
P20040 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
P20040 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC5.14□□□□□ -1.59
P20040 AC107645.1-201ENSMUST00000228660 1810 ntBASIC5.13□□□□□ -1.59
P20040 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
P20040 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
P20040 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
P20040 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
P20040 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
P20040 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC5.13□□□□□ -1.59
P20040 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
P20040 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
P20040 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
P20040 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
P20040 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC5.13□□□□□ -1.59
P20040 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.13□□□□□ -1.59
P20040 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
P20040 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
P20040 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
P20040 Gm14756-201ENSMUST00000116395 240 ntBASIC5.13□□□□□ -1.59
P20040 Gm13811-201ENSMUST00000117800 256 ntBASIC5.13□□□□□ -1.59
P20040 Gm12099-201ENSMUST00000118660 750 ntBASIC5.13□□□□□ -1.59
P20040 Gm12322-201ENSMUST00000121605 389 ntBASIC5.13□□□□□ -1.59
P20040 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
P20040 Gm24687-201ENSMUST00000157758 241 ntBASIC5.13□□□□□ -1.59
P20040 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
P20040 Gm20453-201ENSMUST00000173968 226 ntBASIC5.13□□□□□ -1.59
P20040 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC5.13□□□□□ -1.59
P20040 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
P20040 Gm7952-201ENSMUST00000180540 984 ntBASIC5.13□□□□□ -1.59
P20040 Gm3650-201ENSMUST00000180600 747 ntBASIC5.13□□□□□ -1.59
P20040 Gm27602-201ENSMUST00000183861 111 ntBASIC5.13□□□□□ -1.59
P20040 Gm27160-201ENSMUST00000184837 199 ntBASIC5.13□□□□□ -1.59
P20040 Gm28885-201ENSMUST00000185615 563 ntBASIC5.13□□□□□ -1.59
P20040 Gm5692-201ENSMUST00000187254 1057 ntBASIC5.13□□□□□ -1.59
P20040 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC5.13□□□□□ -1.59
P20040 Gm28973-201ENSMUST00000189310 613 ntBASIC5.13□□□□□ -1.59
P20040 Gm4322-201ENSMUST00000191094 336 ntBASIC5.13□□□□□ -1.59
P20040 Gm2367-201ENSMUST00000192374 472 ntBASIC5.13□□□□□ -1.59
P20040 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC5.13□□□□□ -1.59
P20040 Gm44382-201ENSMUST00000198683 122 ntBASIC5.13□□□□□ -1.59
P20040 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
P20040 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
P20040 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
P20040 Gm44582-201ENSMUST00000209125 445 ntBASIC5.13□□□□□ -1.59
P20040 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
P20040 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC5.13□□□□□ -1.59
P20040 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC5.13□□□□□ -1.59
P20040 AC159297.1-201ENSMUST00000218689 290 ntBASIC5.13□□□□□ -1.59
P20040 AC123658.1-201ENSMUST00000228364 867 ntBASIC5.13□□□□□ -1.59
P20040 AC163664.2-201ENSMUST00000228894 459 ntBASIC5.13□□□□□ -1.59
P20040 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
P20040 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
P20040 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC5.13□□□□□ -1.59
P20040 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
P20040 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
P20040 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
P20040 Gm8526-201ENSMUST00000079153 475 ntBASIC5.13□□□□□ -1.59
P20040 Olfr467-201ENSMUST00000084756 927 ntBASIC5.13□□□□□ -1.59
P20040 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
P20040 AC130827.1-201ENSMUST00000220476 3850 ntBASIC5.13□□□□□ -1.59
P20040 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
P20040 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC5.13□□□□□ -1.59
P20040 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
P20040 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC5.13□□□□□ -1.59
P20040 Gm37735-201ENSMUST00000193995 1406 ntBASIC5.13□□□□□ -1.59
P20040 Gm37060-201ENSMUST00000194997 2397 ntBASIC5.13□□□□□ -1.59
P20040 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
P20040 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
P20040 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
P20040 BC055308-201ENSMUST00000193380 2538 ntBASIC5.13□□□□□ -1.59
P20040 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
P20040 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC5.12□□□□□ -1.59
P20040 Gm19514-201ENSMUST00000206856 4489 ntBASIC5.12□□□□□ -1.59
P20040 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
P20040 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
P20040 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
P20040 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
P20040 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
P20040 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
P20040 Mir700-201ENSMUST00000102169 79 ntBASIC5.12□□□□□ -1.59
P20040 Gm11821-201ENSMUST00000117335 979 ntBASIC5.12□□□□□ -1.59
P20040 Gm14267-201ENSMUST00000119751 496 ntBASIC5.12□□□□□ -1.59
P20040 Gm13493-201ENSMUST00000120318 493 ntBASIC5.12□□□□□ -1.59
P20040 Gm12396-201ENSMUST00000121600 306 ntBASIC5.12□□□□□ -1.59
P20040 Gm22160-201ENSMUST00000158405 328 ntBASIC5.12□□□□□ -1.59
P20040 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
P20040 Gm20480-201ENSMUST00000173953 250 ntBASIC5.12□□□□□ -1.59
P20040 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC5.12□□□□□ -1.59
P20040 Gm25246-201ENSMUST00000175476 69 ntBASIC5.12□□□□□ -1.59
P20040 Mir6992-201ENSMUST00000183342 109 ntBASIC5.12□□□□□ -1.59
P20040 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC5.12□□□□□ -1.59
P20040 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
P20040 Gm21654-201ENSMUST00000188086 691 ntBASIC5.12□□□□□ -1.59
P20040 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC5.12□□□□□ -1.59
P20040 Gm6693-201ENSMUST00000189583 813 ntBASIC5.12□□□□□ -1.59
P20040 Gm38185-201ENSMUST00000193195 694 ntBASIC5.12□□□□□ -1.59
P20040 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms