Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
Cdx1P18111 CT025604.1-201ENSMUST00000221111 3436 ntBASIC4.84□□□□□ -1.63
Cdx1P18111 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Cdx1P18111 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Cdx1P18111 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Cdx1P18111 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
Cdx1P18111 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC4.84□□□□□ -1.64
Cdx1P18111 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC4.84□□□□□ -1.64
Cdx1P18111 Gm42686-201ENSMUST00000199172 4108 ntBASIC4.84□□□□□ -1.64
Cdx1P18111 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Cdx1P18111 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
Cdx1P18111 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
Cdx1P18111 AC153532.2-201ENSMUST00000219753 3844 ntBASIC4.84□□□□□ -1.64
Cdx1P18111 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC4.84□□□□□ -1.64
Cdx1P18111 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
Cdx1P18111 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cdx1P18111 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Cdx1P18111 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cdx1P18111 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Cdx1P18111 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC4.83□□□□□ -1.64
Cdx1P18111 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Cdx1P18111 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC4.83□□□□□ -1.64
Cdx1P18111 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC4.83□□□□□ -1.64
Cdx1P18111 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC4.83□□□□□ -1.64
Cdx1P18111 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC4.83□□□□□ -1.64
Cdx1P18111 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC4.83□□□□□ -1.64
Cdx1P18111 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC4.83□□□□□ -1.64
Cdx1P18111 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cdx1P18111 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
Cdx1P18111 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cdx1P18111 AC139750.1-201ENSMUST00000223962 1300 ntBASIC4.83□□□□□ -1.64
Cdx1P18111 AC115760.1-201ENSMUST00000225160 1327 ntBASIC4.83□□□□□ -1.64
Cdx1P18111 Gm23311-201ENSMUST00000104152 134 ntBASIC4.83□□□□□ -1.64
Cdx1P18111 Gm15531-201ENSMUST00000118062 252 ntBASIC4.83□□□□□ -1.64
Cdx1P18111 Gm11781-201ENSMUST00000118328 472 ntBASIC4.83□□□□□ -1.64
Cdx1P18111 Gm15765-201ENSMUST00000118407 910 ntBASIC4.83□□□□□ -1.64
Cdx1P18111 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC4.83□□□□□ -1.64
Cdx1P18111 Gm11484-201ENSMUST00000119808 338 ntBASIC4.83□□□□□ -1.64
Cdx1P18111 Gm15750-201ENSMUST00000120970 616 ntBASIC4.83□□□□□ -1.64
Cdx1P18111 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC4.83□□□□□ -1.64
Cdx1P18111 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Cdx1P18111 Gm4660-201ENSMUST00000131499 403 ntBASIC4.83□□□□□ -1.64
Cdx1P18111 Gm5125-201ENSMUST00000148614 624 ntBASIC4.83□□□□□ -1.64
Cdx1P18111 Gm25117-201ENSMUST00000157194 144 ntBASIC4.83□□□□□ -1.64
Cdx1P18111 Gm25342-201ENSMUST00000157459 122 ntBASIC4.83□□□□□ -1.64
Cdx1P18111 Gm25550-201ENSMUST00000158079 128 ntBASIC4.83□□□□□ -1.64
Cdx1P18111 Gm25717-201ENSMUST00000158631 353 ntBASIC4.83□□□□□ -1.64
Cdx1P18111 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC4.83□□□□□ -1.64
Cdx1P18111 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Cdx1P18111 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC4.83□□□□□ -1.64
Cdx1P18111 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Cdx1P18111 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Cdx1P18111 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Cdx1P18111 Gm37103-201ENSMUST00000191830 115 ntBASIC4.83□□□□□ -1.64
Cdx1P18111 Ighv1-45-201ENSMUST00000193677 352 ntBASIC4.83□□□□□ -1.64
Cdx1P18111 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC4.83□□□□□ -1.64
Cdx1P18111 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Cdx1P18111 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Cdx1P18111 Gm18914-201ENSMUST00000214625 616 ntBASIC4.83□□□□□ -1.64
Cdx1P18111 AC124732.4-201ENSMUST00000220930 1274 ntBASIC4.83□□□□□ -1.64
Cdx1P18111 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cdx1P18111 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cdx1P18111 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cdx1P18111 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Cdx1P18111 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cdx1P18111 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Cdx1P18111 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Cdx1P18111 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cdx1P18111 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Cdx1P18111 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Cdx1P18111 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
Cdx1P18111 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Cdx1P18111 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cdx1P18111 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC4.83□□□□□ -1.64
Cdx1P18111 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC4.83□□□□□ -1.64
Cdx1P18111 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC4.83□□□□□ -1.64
Cdx1P18111 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC4.83□□□□□ -1.64
Cdx1P18111 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Cdx1P18111 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Cdx1P18111 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC4.83□□□□□ -1.64
Cdx1P18111 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cdx1P18111 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC4.82□□□□□ -1.64
Cdx1P18111 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Cdx1P18111 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Cdx1P18111 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Cdx1P18111 Gm45415-201ENSMUST00000209644 2074 ntBASIC4.82□□□□□ -1.64
Cdx1P18111 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Cdx1P18111 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Cdx1P18111 Gm43169-201ENSMUST00000199544 4734 ntBASIC4.82□□□□□ -1.64
Cdx1P18111 Gm37456-201ENSMUST00000193176 5837 ntBASIC4.82□□□□□ -1.64
Cdx1P18111 Gm15789-201ENSMUST00000118992 1359 ntBASIC4.82□□□□□ -1.64
Cdx1P18111 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Cdx1P18111 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Cdx1P18111 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
Cdx1P18111 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cdx1P18111 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC4.82□□□□□ -1.64
Cdx1P18111 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Cdx1P18111 Mir680-3-201ENSMUST00000102298 87 ntBASIC4.82□□□□□ -1.64
Cdx1P18111 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Cdx1P18111 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms