Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Lnp1-201ENSMUST00000210579 671 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Gm30132-202ENSMUST00000212825 819 ntTSL 3 BASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Spata19-204ENSMUST00000214287 642 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 AC127242.3-201ENSMUST00000222009 580 ntBASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 AC165157.1-201ENSMUST00000222981 580 ntBASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 CT030260.1-201ENSMUST00000223243 442 ntBASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 AC102603.1-201ENSMUST00000227481 584 ntBASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 AC116319.2-201ENSMUST00000228159 984 ntBASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Mir135a-1-201ENSMUST00000083473 90 ntBASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Gm43577-201ENSMUST00000197090 3344 ntBASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Gm38322-201ENSMUST00000194074 2300 ntBASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Gm43613-201ENSMUST00000199409 1613 ntBASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Pcdh1F7BJK1 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Gm25757-201ENSMUST00000103986 123 ntBASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Gm25760-201ENSMUST00000103989 132 ntBASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Gm12874-201ENSMUST00000117190 913 ntBASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Gm8624-201ENSMUST00000118083 432 ntBASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Gm12994-201ENSMUST00000119601 447 ntBASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Gm14837-201ENSMUST00000119688 206 ntBASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Gm13486-201ENSMUST00000119910 282 ntBASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Gm13339-201ENSMUST00000120651 510 ntBASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Gm25969-201ENSMUST00000157166 132 ntBASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Gm22035-201ENSMUST00000157284 228 ntBASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Gm24781-201ENSMUST00000157636 117 ntBASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Gm9671-201ENSMUST00000171502 547 ntBASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Gm26381-201ENSMUST00000174895 92 ntBASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Gm24756-201ENSMUST00000177002 96 ntBASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Gm26179-201ENSMUST00000177723 132 ntBASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Gm28492-201ENSMUST00000190899 1019 ntBASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Gm26413-201ENSMUST00000196783 126 ntBASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Igkv4-83-201ENSMUST00000196933 334 ntBASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Gm8182-201ENSMUST00000197863 769 ntBASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Gm18593-201ENSMUST00000200754 1139 ntBASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Gm43578-201ENSMUST00000201250 459 ntBASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Gm19617-201ENSMUST00000202977 308 ntBASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Gm44979-201ENSMUST00000206218 287 ntBASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Gm5027-201ENSMUST00000206700 375 ntBASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Gm9628-201ENSMUST00000222169 725 ntBASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 AC156016.2-201ENSMUST00000228200 525 ntBASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Gm5321-201ENSMUST00000072050 447 ntBASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 n-R5s56-201ENSMUST00000082521 105 ntBASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 AC155298.1-201ENSMUST00000225350 3250 ntBASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Speer4e-201ENSMUST00000159973 1603 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
Pcdh1F7BJK1 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 91.4 ms