Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm22261-201ENSMUST00000158691 324 ntBASIC6.37□□□□□ -1.39
Scn3aA2ASI5 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC6.37□□□□□ -1.39
Scn3aA2ASI5 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC6.37□□□□□ -1.39
Scn3aA2ASI5 Gm19880-201ENSMUST00000207731 318 ntBASIC6.37□□□□□ -1.39
Scn3aA2ASI5 Gm45908-201ENSMUST00000212977 1177 ntBASIC6.37□□□□□ -1.39
Scn3aA2ASI5 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC6.37□□□□□ -1.39
Scn3aA2ASI5 Thoc7-209ENSMUST00000225325 765 ntBASIC6.37□□□□□ -1.39
Scn3aA2ASI5 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Scn3aA2ASI5 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Scn3aA2ASI5 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC6.37□□□□□ -1.39
Scn3aA2ASI5 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Scn3aA2ASI5 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Scn3aA2ASI5 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Scn3aA2ASI5 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Scn3aA2ASI5 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Scn3aA2ASI5 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Scn3aA2ASI5 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Scn3aA2ASI5 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Scn3aA2ASI5 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Scn3aA2ASI5 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Scn3aA2ASI5 AC154755.2-201ENSMUST00000224384 2857 ntBASIC6.37□□□□□ -1.39
Scn3aA2ASI5 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Scn3aA2ASI5 Gm42540-201ENSMUST00000200319 2008 ntBASIC6.37□□□□□ -1.39
Scn3aA2ASI5 AC132852.1-201ENSMUST00000214683 2324 ntBASIC6.37□□□□□ -1.39
Scn3aA2ASI5 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Scn3aA2ASI5 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Scn3aA2ASI5 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Scn3aA2ASI5 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Scn3aA2ASI5 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC6.37□□□□□ -1.39
Scn3aA2ASI5 Defa-ps11-201ENSMUST00000119719 299 ntBASIC6.37□□□□□ -1.39
Scn3aA2ASI5 Gm8215-201ENSMUST00000120627 990 ntBASIC6.37□□□□□ -1.39
Scn3aA2ASI5 Gm25291-201ENSMUST00000122795 144 ntBASIC6.37□□□□□ -1.39
Scn3aA2ASI5 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC6.37□□□□□ -1.39
Scn3aA2ASI5 Gm6872-201ENSMUST00000165001 700 ntBASIC6.37□□□□□ -1.39
Scn3aA2ASI5 Gm3307-201ENSMUST00000176164 632 ntBASIC6.37□□□□□ -1.39
Scn3aA2ASI5 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Scn3aA2ASI5 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC6.37□□□□□ -1.39
Scn3aA2ASI5 Gm43554-201ENSMUST00000199987 186 ntBASIC6.37□□□□□ -1.39
Scn3aA2ASI5 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC6.37□□□□□ -1.39
Scn3aA2ASI5 AC160980.2-201ENSMUST00000225131 949 ntBASIC6.37□□□□□ -1.39
Scn3aA2ASI5 AC154738.7-201ENSMUST00000228606 579 ntBASIC6.37□□□□□ -1.39
Scn3aA2ASI5 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Scn3aA2ASI5 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Scn3aA2ASI5 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Scn3aA2ASI5 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Scn3aA2ASI5 Gm8878-201ENSMUST00000173552 1725 ntBASIC6.36□□□□□ -1.39
Scn3aA2ASI5 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Scn3aA2ASI5 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Scn3aA2ASI5 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Scn3aA2ASI5 AC130661.1-201ENSMUST00000218248 1680 ntBASIC6.36□□□□□ -1.39
Scn3aA2ASI5 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Scn3aA2ASI5 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC6.36□□□□□ -1.39
Scn3aA2ASI5 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Scn3aA2ASI5 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Scn3aA2ASI5 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
Scn3aA2ASI5 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Scn3aA2ASI5 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Scn3aA2ASI5 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Scn3aA2ASI5 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Scn3aA2ASI5 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Scn3aA2ASI5 Gm25422-201ENSMUST00000104219 129 ntBASIC6.36□□□□□ -1.39
Scn3aA2ASI5 Gm4989-201ENSMUST00000118711 749 ntBASIC6.36□□□□□ -1.39
Scn3aA2ASI5 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Scn3aA2ASI5 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC6.36□□□□□ -1.39
Scn3aA2ASI5 Ighv5-21-201ENSMUST00000191935 295 ntBASIC6.36□□□□□ -1.39
Scn3aA2ASI5 Mir6994-201ENSMUST00000198985 73 ntBASIC6.36□□□□□ -1.39
Scn3aA2ASI5 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC6.36□□□□□ -1.39
Scn3aA2ASI5 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC6.36□□□□□ -1.39
Scn3aA2ASI5 Gm18541-201ENSMUST00000215935 538 ntBASIC6.36□□□□□ -1.39
Scn3aA2ASI5 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC6.36□□□□□ -1.39
Scn3aA2ASI5 AC134860.4-201ENSMUST00000223592 978 ntBASIC6.36□□□□□ -1.39
Scn3aA2ASI5 AC154806.3-201ENSMUST00000227376 439 ntBASIC6.36□□□□□ -1.39
Scn3aA2ASI5 AC154806.4-201ENSMUST00000227406 439 ntBASIC6.36□□□□□ -1.39
Scn3aA2ASI5 AC192088.3-201ENSMUST00000227858 831 ntBASIC6.36□□□□□ -1.39
Scn3aA2ASI5 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Scn3aA2ASI5 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Scn3aA2ASI5 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Scn3aA2ASI5 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Scn3aA2ASI5 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Scn3aA2ASI5 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC6.36□□□□□ -1.39
Scn3aA2ASI5 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC6.36□□□□□ -1.39
Scn3aA2ASI5 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC6.36□□□□□ -1.39
Scn3aA2ASI5 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Scn3aA2ASI5 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
Scn3aA2ASI5 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Scn3aA2ASI5 Gm42541-201ENSMUST00000199871 2249 ntBASIC6.35□□□□□ -1.39
Scn3aA2ASI5 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Scn3aA2ASI5 Gm4011-201ENSMUST00000174657 2555 ntBASIC6.35□□□□□ -1.39
Scn3aA2ASI5 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC6.35□□□□□ -1.39
Scn3aA2ASI5 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Scn3aA2ASI5 Gm6134-201ENSMUST00000117265 171 ntBASIC6.35□□□□□ -1.39
Scn3aA2ASI5 Gm12074-201ENSMUST00000120189 219 ntBASIC6.35□□□□□ -1.39
Scn3aA2ASI5 Gm12267-201ENSMUST00000121609 761 ntBASIC6.35□□□□□ -1.39
Scn3aA2ASI5 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Scn3aA2ASI5 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC6.35□□□□□ -1.39
Scn3aA2ASI5 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC6.35□□□□□ -1.39
Scn3aA2ASI5 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC6.35□□□□□ -1.39
Scn3aA2ASI5 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Scn3aA2ASI5 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC6.35□□□□□ -1.39
Scn3aA2ASI5 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 103.8 ms