Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Galnt5-201ENSMUST00000112616 4225 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Clp1Q99LI9 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Clp1Q99LI9 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Clp1Q99LI9 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Clp1Q99LI9 Gm42508-201ENSMUST00000199972 3292 ntBASIC7.32□□□□□ -1.24
Clp1Q99LI9 AC159188.2-201ENSMUST00000224103 1301 ntBASIC7.32□□□□□ -1.24
Clp1Q99LI9 Msantd4-201ENSMUST00000047173 2731 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Clp1Q99LI9 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Clp1Q99LI9 Pcyt1a-203ENSMUST00000115137 4244 ntTSL 5 BASIC7.32□□□□□ -1.24
Clp1Q99LI9 Gm3892-202ENSMUST00000178043 3539 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Clp1Q99LI9 Gm10593-201ENSMUST00000178906 3539 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Clp1Q99LI9 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Clp1Q99LI9 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Clp1Q99LI9 Gm24935-201ENSMUST00000103770 110 ntBASIC7.32□□□□□ -1.24
Clp1Q99LI9 Gm23311-201ENSMUST00000104152 134 ntBASIC7.32□□□□□ -1.24
Clp1Q99LI9 Gm15765-201ENSMUST00000118407 910 ntBASIC7.32□□□□□ -1.24
Clp1Q99LI9 Gm13772-201ENSMUST00000118431 317 ntBASIC7.32□□□□□ -1.24
Clp1Q99LI9 Gm14018-201ENSMUST00000119042 455 ntBASIC7.32□□□□□ -1.24
Clp1Q99LI9 Gm11913-201ENSMUST00000119094 336 ntBASIC7.32□□□□□ -1.24
Clp1Q99LI9 Gm13751-201ENSMUST00000120280 752 ntBASIC7.32□□□□□ -1.24
Clp1Q99LI9 Gm16463-201ENSMUST00000120527 721 ntBASIC7.32□□□□□ -1.24
Clp1Q99LI9 Gm13642-201ENSMUST00000121697 381 ntBASIC7.32□□□□□ -1.24
Clp1Q99LI9 Gm11879-201ENSMUST00000121885 702 ntBASIC7.32□□□□□ -1.24
Clp1Q99LI9 Gm12518-201ENSMUST00000122075 779 ntBASIC7.32□□□□□ -1.24
Clp1Q99LI9 Gm22478-201ENSMUST00000122570 154 ntBASIC7.32□□□□□ -1.24
Clp1Q99LI9 Gm24343-201ENSMUST00000158708 111 ntBASIC7.32□□□□□ -1.24
Clp1Q99LI9 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Clp1Q99LI9 Gm25675-201ENSMUST00000174979 118 ntBASIC7.32□□□□□ -1.24
Clp1Q99LI9 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC7.32□□□□□ -1.24
Clp1Q99LI9 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC7.32□□□□□ -1.24
Clp1Q99LI9 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC7.32□□□□□ -1.24
Clp1Q99LI9 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC7.32□□□□□ -1.24
Clp1Q99LI9 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Clp1Q99LI9 Gm43116-201ENSMUST00000199789 195 ntBASIC7.32□□□□□ -1.24
Clp1Q99LI9 Gm4742-201ENSMUST00000200261 771 ntBASIC7.32□□□□□ -1.24
Clp1Q99LI9 AC120011.1-201ENSMUST00000202147 744 ntBASIC7.32□□□□□ -1.24
Clp1Q99LI9 Gm43929-201ENSMUST00000203025 409 ntBASIC7.32□□□□□ -1.24
Clp1Q99LI9 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC7.32□□□□□ -1.24
Clp1Q99LI9 Gm44091-201ENSMUST00000205212 649 ntBASIC7.32□□□□□ -1.24
Clp1Q99LI9 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC7.32□□□□□ -1.24
Clp1Q99LI9 Gm44940-201ENSMUST00000206225 1247 ntBASIC7.32□□□□□ -1.24
Clp1Q99LI9 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Clp1Q99LI9 Gm18586-201ENSMUST00000217265 518 ntBASIC7.32□□□□□ -1.24
Clp1Q99LI9 AC124399.1-201ENSMUST00000218334 590 ntBASIC7.32□□□□□ -1.24
Clp1Q99LI9 Gm19599-201ENSMUST00000218898 358 ntBASIC7.32□□□□□ -1.24
Clp1Q99LI9 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC7.32□□□□□ -1.24
Clp1Q99LI9 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Clp1Q99LI9 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Clp1Q99LI9 n-R5s27-201ENSMUST00000093699 119 ntBASIC7.32□□□□□ -1.24
Clp1Q99LI9 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Clp1Q99LI9 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Clp1Q99LI9 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Clp1Q99LI9 Gm44950-201ENSMUST00000206403 2296 ntBASIC7.32□□□□□ -1.24
Clp1Q99LI9 Gm44777-201ENSMUST00000205941 4052 ntBASIC7.32□□□□□ -1.24
Clp1Q99LI9 Gm37984-201ENSMUST00000191641 3733 ntBASIC7.32□□□□□ -1.24
Clp1Q99LI9 Elf5-201ENSMUST00000028609 2222 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Clp1Q99LI9 Brd8-202ENSMUST00000097626 3005 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Clp1Q99LI9 Gm805-201ENSMUST00000181667 3160 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Clp1Q99LI9 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Clp1Q99LI9 Dgkh-204ENSMUST00000227767 3319 ntBASIC7.32□□□□□ -1.24
Clp1Q99LI9 Gm5841-201ENSMUST00000195307 2177 ntBASIC7.32□□□□□ -1.24
Clp1Q99LI9 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Clp1Q99LI9 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC7.32□□□□□ -1.24
Clp1Q99LI9 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Clp1Q99LI9 Gm13083-201ENSMUST00000105773 2464 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Clp1Q99LI9 Vmn1r44-212ENSMUST00000228183 1838 ntBASIC7.31□□□□□ -1.24
Clp1Q99LI9 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Clp1Q99LI9 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Clp1Q99LI9 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
Clp1Q99LI9 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
Clp1Q99LI9 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Clp1Q99LI9 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Clp1Q99LI9 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Clp1Q99LI9 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC7.31□□□□□ -1.24
Clp1Q99LI9 Gm22370-201ENSMUST00000102422 83 ntBASIC7.31□□□□□ -1.24
Clp1Q99LI9 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Clp1Q99LI9 Mir466n-201ENSMUST00000104798 94 ntBASIC7.31□□□□□ -1.24
Clp1Q99LI9 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Clp1Q99LI9 Gm14981-201ENSMUST00000117325 943 ntBASIC7.31□□□□□ -1.24
Clp1Q99LI9 Gm8250-201ENSMUST00000117398 774 ntBASIC7.31□□□□□ -1.24
Clp1Q99LI9 Gm11252-201ENSMUST00000120572 939 ntBASIC7.31□□□□□ -1.24
Clp1Q99LI9 Gm12770-201ENSMUST00000121734 462 ntBASIC7.31□□□□□ -1.24
Clp1Q99LI9 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Clp1Q99LI9 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC7.31□□□□□ -1.24
Clp1Q99LI9 Gm25185-201ENSMUST00000157754 96 ntBASIC7.31□□□□□ -1.24
Clp1Q99LI9 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC7.31□□□□□ -1.24
Clp1Q99LI9 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Clp1Q99LI9 Gm23450-201ENSMUST00000178285 91 ntBASIC7.31□□□□□ -1.24
Clp1Q99LI9 n-R5s209-201ENSMUST00000179494 119 ntBASIC7.31□□□□□ -1.24
Clp1Q99LI9 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Clp1Q99LI9 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Clp1Q99LI9 Zfp939-202ENSMUST00000186855 2480 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Clp1Q99LI9 Scgb2b33-201ENSMUST00000187413 334 ntBASIC7.31□□□□□ -1.24
Clp1Q99LI9 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC7.31□□□□□ -1.24
Clp1Q99LI9 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Clp1Q99LI9 Gm38146-201ENSMUST00000194121 1293 ntBASIC7.31□□□□□ -1.24
Clp1Q99LI9 Gm9403-201ENSMUST00000196299 2181 ntBASIC7.31□□□□□ -1.24
Clp1Q99LI9 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Clp1Q99LI9 Gm7166-201ENSMUST00000199715 303 ntBASIC7.31□□□□□ -1.24
Clp1Q99LI9 Gm31230-201ENSMUST00000199725 785 ntBASIC7.31□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms