Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 AL591843.1-201ENSMUST00000223686 3082 ntBASIC6.15□□□□□ -1.43
Trim43aQ3TL54 Gm36936-201ENSMUST00000194508 2749 ntBASIC6.15□□□□□ -1.43
Trim43aQ3TL54 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Trim43aQ3TL54 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC6.15□□□□□ -1.43
Trim43aQ3TL54 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Trim43aQ3TL54 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Trim43aQ3TL54 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC6.15□□□□□ -1.43
Trim43aQ3TL54 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Trim43aQ3TL54 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC6.15□□□□□ -1.43
Trim43aQ3TL54 AC107232.1-201ENSMUST00000227785 1503 ntBASIC6.15□□□□□ -1.43
Trim43aQ3TL54 Gm5832-201ENSMUST00000121704 1582 ntBASIC6.14□□□□□ -1.43
Trim43aQ3TL54 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Trim43aQ3TL54 Gm44586-201ENSMUST00000207166 2737 ntBASIC6.14□□□□□ -1.43
Trim43aQ3TL54 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Trim43aQ3TL54 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
Trim43aQ3TL54 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC6.14□□□□□ -1.43
Trim43aQ3TL54 Gm37703-201ENSMUST00000192292 1784 ntBASIC6.14□□□□□ -1.43
Trim43aQ3TL54 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC6.14□□□□□ -1.43
Trim43aQ3TL54 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Trim43aQ3TL54 Gm11561-201ENSMUST00000117429 417 ntBASIC6.14□□□□□ -1.43
Trim43aQ3TL54 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
Trim43aQ3TL54 Gm14065-201ENSMUST00000120848 585 ntBASIC6.14□□□□□ -1.43
Trim43aQ3TL54 Gm11679-201ENSMUST00000121830 779 ntBASIC6.14□□□□□ -1.43
Trim43aQ3TL54 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC6.14□□□□□ -1.43
Trim43aQ3TL54 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC6.14□□□□□ -1.43
Trim43aQ3TL54 Gm7713-201ENSMUST00000181201 1007 ntBASIC6.14□□□□□ -1.43
Trim43aQ3TL54 Gm26923-201ENSMUST00000182615 996 ntBASIC6.14□□□□□ -1.43
Trim43aQ3TL54 Gm29509-201ENSMUST00000185716 321 ntBASIC6.14□□□□□ -1.43
Trim43aQ3TL54 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC6.14□□□□□ -1.43
Trim43aQ3TL54 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC6.14□□□□□ -1.43
Trim43aQ3TL54 Gm44316-201ENSMUST00000199274 97 ntBASIC6.14□□□□□ -1.43
Trim43aQ3TL54 Gm44219-201ENSMUST00000203005 273 ntBASIC6.14□□□□□ -1.43
Trim43aQ3TL54 Gm44162-201ENSMUST00000203543 544 ntBASIC6.14□□□□□ -1.43
Trim43aQ3TL54 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC6.14□□□□□ -1.43
Trim43aQ3TL54 Gm9292-201ENSMUST00000222008 710 ntBASIC6.14□□□□□ -1.43
Trim43aQ3TL54 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trim43aQ3TL54 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Trim43aQ3TL54 Snora30-201ENSMUST00000083325 130 ntBASIC6.14□□□□□ -1.43
Trim43aQ3TL54 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC6.14□□□□□ -1.43
Trim43aQ3TL54 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trim43aQ3TL54 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trim43aQ3TL54 AC123629.1-201ENSMUST00000225669 1364 ntBASIC6.14□□□□□ -1.43
Trim43aQ3TL54 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trim43aQ3TL54 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC6.14□□□□□ -1.43
Trim43aQ3TL54 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trim43aQ3TL54 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Trim43aQ3TL54 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trim43aQ3TL54 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trim43aQ3TL54 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trim43aQ3TL54 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trim43aQ3TL54 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC6.13□□□□□ -1.43
Trim43aQ3TL54 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trim43aQ3TL54 Gm24709-201ENSMUST00000104123 132 ntBASIC6.13□□□□□ -1.43
Trim43aQ3TL54 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trim43aQ3TL54 Gm16074-201ENSMUST00000119524 444 ntBASIC6.13□□□□□ -1.43
Trim43aQ3TL54 Gm11369-201ENSMUST00000120812 318 ntBASIC6.13□□□□□ -1.43
Trim43aQ3TL54 Gm12618-201ENSMUST00000121754 483 ntBASIC6.13□□□□□ -1.43
Trim43aQ3TL54 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trim43aQ3TL54 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trim43aQ3TL54 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trim43aQ3TL54 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Trim43aQ3TL54 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trim43aQ3TL54 Gm4832-201ENSMUST00000182679 399 ntBASIC6.13□□□□□ -1.43
Trim43aQ3TL54 Gm27653-201ENSMUST00000185037 136 ntBASIC6.13□□□□□ -1.43
Trim43aQ3TL54 Gm28195-201ENSMUST00000186992 372 ntBASIC6.13□□□□□ -1.43
Trim43aQ3TL54 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trim43aQ3TL54 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trim43aQ3TL54 Gm19124-201ENSMUST00000191041 832 ntBASIC6.13□□□□□ -1.43
Trim43aQ3TL54 Ighv1-10-201ENSMUST00000194372 355 ntBASIC6.13□□□□□ -1.43
Trim43aQ3TL54 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC6.13□□□□□ -1.43
Trim43aQ3TL54 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC6.13□□□□□ -1.43
Trim43aQ3TL54 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC6.13□□□□□ -1.43
Trim43aQ3TL54 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC6.13□□□□□ -1.43
Trim43aQ3TL54 Gm44134-202ENSMUST00000204777 545 ntBASIC6.13□□□□□ -1.43
Trim43aQ3TL54 Gm44940-201ENSMUST00000206225 1247 ntBASIC6.13□□□□□ -1.43
Trim43aQ3TL54 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC6.13□□□□□ -1.43
Trim43aQ3TL54 Gm7570-201ENSMUST00000215246 698 ntBASIC6.13□□□□□ -1.43
Trim43aQ3TL54 Gm32526-201ENSMUST00000221878 981 ntBASIC6.13□□□□□ -1.43
Trim43aQ3TL54 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trim43aQ3TL54 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Trim43aQ3TL54 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Trim43aQ3TL54 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC6.13□□□□□ -1.43
Trim43aQ3TL54 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trim43aQ3TL54 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC6.13□□□□□ -1.43
Trim43aQ3TL54 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Trim43aQ3TL54 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Trim43aQ3TL54 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim43aQ3TL54 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim43aQ3TL54 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC6.12□□□□□ -1.43
Trim43aQ3TL54 Gm16270-201ENSMUST00000160327 3238 ntBASIC6.12□□□□□ -1.43
Trim43aQ3TL54 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC6.12□□□□□ -1.43
Trim43aQ3TL54 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim43aQ3TL54 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim43aQ3TL54 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Trim43aQ3TL54 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim43aQ3TL54 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim43aQ3TL54 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim43aQ3TL54 Snora35-201ENSMUST00000104579 128 ntBASIC6.12□□□□□ -1.43
Trim43aQ3TL54 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Trim43aQ3TL54 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms