Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm24188-201ENSMUST00000157980 108 ntBASIC9.08□□□□□ -0.96
Col17a1Q07563 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC9.08□□□□□ -0.96
Col17a1Q07563 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Col17a1Q07563 Gm26925-201ENSMUST00000182470 957 ntBASIC9.08□□□□□ -0.96
Col17a1Q07563 Mir6391-201ENSMUST00000184391 104 ntBASIC9.08□□□□□ -0.96
Col17a1Q07563 Gm28975-201ENSMUST00000186412 686 ntBASIC9.08□□□□□ -0.96
Col17a1Q07563 Gm5734-201ENSMUST00000189787 913 ntBASIC9.08□□□□□ -0.96
Col17a1Q07563 Gm34176-201ENSMUST00000192621 474 ntBASIC9.08□□□□□ -0.96
Col17a1Q07563 Gm37670-201ENSMUST00000193622 229 ntBASIC9.08□□□□□ -0.96
Col17a1Q07563 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC9.08□□□□□ -0.96
Col17a1Q07563 Gm7181-201ENSMUST00000202197 434 ntBASIC9.08□□□□□ -0.96
Col17a1Q07563 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC9.08□□□□□ -0.96
Col17a1Q07563 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC9.08□□□□□ -0.96
Col17a1Q07563 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC9.08□□□□□ -0.96
Col17a1Q07563 Prl7a1-203ENSMUST00000224852 1283 ntBASIC9.08□□□□□ -0.96
Col17a1Q07563 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC9.08□□□□□ -0.96
Col17a1Q07563 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Col17a1Q07563 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Col17a1Q07563 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Col17a1Q07563 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Col17a1Q07563 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Col17a1Q07563 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Col17a1Q07563 Amot-201ENSMUST00000112835 6519 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Col17a1Q07563 Vmn1r70-203ENSMUST00000226255 4868 ntAPPRIS P2 BASIC9.07□□□□□ -0.96
Col17a1Q07563 AC129208.1-201ENSMUST00000227474 2906 ntBASIC9.07□□□□□ -0.96
Col17a1Q07563 Frem3-201ENSMUST00000039695 6384 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Col17a1Q07563 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC9.07□□□□□ -0.96
Col17a1Q07563 Nebl-201ENSMUST00000028080 5780 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Col17a1Q07563 Sla-202ENSMUST00000164163 2952 ntAPPRIS P3 TSL 5 BASIC9.07□□□□□ -0.96
Col17a1Q07563 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC9.07□□□□□ -0.96
Col17a1Q07563 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Col17a1Q07563 Gm6427-201ENSMUST00000118721 979 ntBASIC9.07□□□□□ -0.96
Col17a1Q07563 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Col17a1Q07563 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Col17a1Q07563 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Col17a1Q07563 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Col17a1Q07563 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Col17a1Q07563 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Col17a1Q07563 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Col17a1Q07563 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Col17a1Q07563 Mir7658-201ENSMUST00000184043 57 ntBASIC9.07□□□□□ -0.96
Col17a1Q07563 Gm27387-201ENSMUST00000184583 116 ntBASIC9.07□□□□□ -0.96
Col17a1Q07563 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC9.07□□□□□ -0.96
Col17a1Q07563 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC9.07□□□□□ -0.96
Col17a1Q07563 Gm43408-201ENSMUST00000198263 440 ntBASIC9.07□□□□□ -0.96
Col17a1Q07563 Gm44757-201ENSMUST00000206373 157 ntBASIC9.07□□□□□ -0.96
Col17a1Q07563 Gm21041-201ENSMUST00000214829 823 ntBASIC9.07□□□□□ -0.96
Col17a1Q07563 AC109180.1-201ENSMUST00000218676 398 ntBASIC9.07□□□□□ -0.96
Col17a1Q07563 AC123061.2-201ENSMUST00000226234 802 ntBASIC9.07□□□□□ -0.96
Col17a1Q07563 AC131997.2-201ENSMUST00000227452 362 ntBASIC9.07□□□□□ -0.96
Col17a1Q07563 Gm20287-201ENSMUST00000172848 2367 ntBASIC9.07□□□□□ -0.96
Col17a1Q07563 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Col17a1Q07563 Lingo2-202ENSMUST00000098151 2781 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Col17a1Q07563 Ash1l-202ENSMUST00000186583 11644 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Col17a1Q07563 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Col17a1Q07563 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Col17a1Q07563 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Col17a1Q07563 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Col17a1Q07563 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Col17a1Q07563 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Col17a1Q07563 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Col17a1Q07563 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Col17a1Q07563 Zfp592-201ENSMUST00000107353 7297 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Col17a1Q07563 Gm37249-201ENSMUST00000195185 2869 ntBASIC9.06□□□□□ -0.96
Col17a1Q07563 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Col17a1Q07563 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC9.06□□□□□ -0.96
Col17a1Q07563 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Col17a1Q07563 Gm37534-201ENSMUST00000194483 5222 ntBASIC9.06□□□□□ -0.96
Col17a1Q07563 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Col17a1Q07563 Gm16254-201ENSMUST00000131528 730 ntBASIC9.06□□□□□ -0.96
Col17a1Q07563 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC9.06□□□□□ -0.96
Col17a1Q07563 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Col17a1Q07563 Gm24745-201ENSMUST00000157840 85 ntBASIC9.06□□□□□ -0.96
Col17a1Q07563 Gm26362-201ENSMUST00000158865 315 ntBASIC9.06□□□□□ -0.96
Col17a1Q07563 Gm22501-201ENSMUST00000158981 127 ntBASIC9.06□□□□□ -0.96
Col17a1Q07563 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Col17a1Q07563 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Col17a1Q07563 Gm21070-201ENSMUST00000182425 985 ntBASIC9.06□□□□□ -0.96
Col17a1Q07563 Ighv10-4-201ENSMUST00000193702 299 ntBASIC9.06□□□□□ -0.96
Col17a1Q07563 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC9.06□□□□□ -0.96
Col17a1Q07563 AC154417.1-201ENSMUST00000223876 476 ntBASIC9.06□□□□□ -0.96
Col17a1Q07563 AC140288.1-201ENSMUST00000226329 503 ntBASIC9.06□□□□□ -0.96
Col17a1Q07563 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC9.06□□□□□ -0.96
Col17a1Q07563 AC164437.5-201ENSMUST00000227235 4414 ntBASIC9.06□□□□□ -0.96
Col17a1Q07563 Gm28359-201ENSMUST00000187470 1322 ntBASIC9.06□□□□□ -0.96
Col17a1Q07563 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Col17a1Q07563 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Col17a1Q07563 Ryr1-201ENSMUST00000032813 15352 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Col17a1Q07563 Rag1-201ENSMUST00000078494 6608 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Col17a1Q07563 Sfmbt2-205ENSMUST00000116594 7821 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Col17a1Q07563 Dock8-201ENSMUST00000025831 7810 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col17a1Q07563 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col17a1Q07563 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Col17a1Q07563 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col17a1Q07563 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC9.05□□□□□ -0.96
Col17a1Q07563 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Col17a1Q07563 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Col17a1Q07563 Gm9308-201ENSMUST00000119073 448 ntBASIC9.05□□□□□ -0.96
Col17a1Q07563 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col17a1Q07563 Mir6960-201ENSMUST00000183449 61 ntBASIC9.05□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 117.3 ms