Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
NcanP55066 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC6.33□□□□□ -1.4
NcanP55066 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
NcanP55066 Gm12328-201ENSMUST00000118611 197 ntBASIC6.33□□□□□ -1.4
NcanP55066 Gm12583-201ENSMUST00000120677 853 ntBASIC6.33□□□□□ -1.4
NcanP55066 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC6.33□□□□□ -1.4
NcanP55066 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC6.33□□□□□ -1.4
NcanP55066 Magea9-ps-201ENSMUST00000140655 732 ntBASIC6.33□□□□□ -1.4
NcanP55066 Mir1946b-201ENSMUST00000157853 133 ntBASIC6.33□□□□□ -1.4
NcanP55066 Magea9-ps-202ENSMUST00000167328 899 ntBASIC6.33□□□□□ -1.4
NcanP55066 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
NcanP55066 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC6.33□□□□□ -1.4
NcanP55066 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NcanP55066 Gm37097-201ENSMUST00000193676 336 ntBASIC6.33□□□□□ -1.4
NcanP55066 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC6.33□□□□□ -1.4
NcanP55066 Gm43164-201ENSMUST00000202529 2128 ntBASIC6.33□□□□□ -1.4
NcanP55066 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC6.33□□□□□ -1.4
NcanP55066 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC6.33□□□□□ -1.4
NcanP55066 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC6.33□□□□□ -1.4
NcanP55066 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC6.33□□□□□ -1.4
NcanP55066 Gm19154-201ENSMUST00000223330 940 ntBASIC6.33□□□□□ -1.4
NcanP55066 AC139758.1-201ENSMUST00000226573 930 ntBASIC6.33□□□□□ -1.4
NcanP55066 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NcanP55066 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NcanP55066 Gm8412-201ENSMUST00000077493 440 ntBASIC6.33□□□□□ -1.4
NcanP55066 Mir449a-201ENSMUST00000083641 91 ntBASIC6.33□□□□□ -1.4
NcanP55066 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC6.33□□□□□ -1.4
NcanP55066 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NcanP55066 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
NcanP55066 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NcanP55066 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
NcanP55066 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
NcanP55066 Gm43019-201ENSMUST00000196948 2863 ntBASIC6.33□□□□□ -1.4
NcanP55066 Olfr1183-202ENSMUST00000213115 8258 ntTSL 5 BASIC6.33□□□□□ -1.4
NcanP55066 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
NcanP55066 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
NcanP55066 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NcanP55066 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
NcanP55066 Gm6558-201ENSMUST00000191934 1973 ntBASIC6.33□□□□□ -1.4
NcanP55066 Gm43496-201ENSMUST00000201682 3001 ntBASIC6.33□□□□□ -1.4
NcanP55066 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
NcanP55066 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NcanP55066 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
NcanP55066 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
NcanP55066 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NcanP55066 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NcanP55066 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NcanP55066 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC6.32□□□□□ -1.4
NcanP55066 Gm38276-201ENSMUST00000192446 1343 ntBASIC6.32□□□□□ -1.4
NcanP55066 Gm45172-201ENSMUST00000206054 1301 ntBASIC6.32□□□□□ -1.4
NcanP55066 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
NcanP55066 CT030159.1-201ENSMUST00000221580 2261 ntBASIC6.32□□□□□ -1.4
NcanP55066 AC167013.5-201ENSMUST00000227597 2947 ntBASIC6.32□□□□□ -1.4
NcanP55066 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC6.32□□□□□ -1.4
NcanP55066 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
NcanP55066 Gm24117-201ENSMUST00000103973 133 ntBASIC6.32□□□□□ -1.4
NcanP55066 Gm4989-201ENSMUST00000118711 749 ntBASIC6.32□□□□□ -1.4
NcanP55066 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC6.32□□□□□ -1.4
NcanP55066 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC6.32□□□□□ -1.4
NcanP55066 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NcanP55066 Gm24730-201ENSMUST00000158228 117 ntBASIC6.32□□□□□ -1.4
NcanP55066 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC6.32□□□□□ -1.4
NcanP55066 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC6.32□□□□□ -1.4
NcanP55066 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC6.32□□□□□ -1.4
NcanP55066 Gm18407-201ENSMUST00000192126 790 ntBASIC6.32□□□□□ -1.4
NcanP55066 Rnu3a-202ENSMUST00000196710 213 ntBASIC6.32□□□□□ -1.4
NcanP55066 Gm43467-201ENSMUST00000197441 437 ntBASIC6.32□□□□□ -1.4
NcanP55066 Gm43929-201ENSMUST00000203025 409 ntBASIC6.32□□□□□ -1.4
NcanP55066 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC6.32□□□□□ -1.4
NcanP55066 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NcanP55066 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
NcanP55066 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
NcanP55066 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
NcanP55066 n-R5s89-201ENSMUST00000083532 104 ntBASIC6.32□□□□□ -1.4
NcanP55066 Rnu3a-201ENSMUST00000083936 214 ntBASIC6.32□□□□□ -1.4
NcanP55066 Gm9386-201ENSMUST00000095195 381 ntBASIC6.32□□□□□ -1.4
NcanP55066 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC6.32□□□□□ -1.4
NcanP55066 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NcanP55066 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
NcanP55066 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
NcanP55066 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NcanP55066 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
NcanP55066 CT025535.2-201ENSMUST00000228572 7441 ntBASIC6.32□□□□□ -1.4
NcanP55066 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC6.32□□□□□ -1.4
NcanP55066 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NcanP55066 Gm43211-201ENSMUST00000196901 1899 ntBASIC6.32□□□□□ -1.4
NcanP55066 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NcanP55066 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
NcanP55066 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NcanP55066 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC6.32□□□□□ -1.4
NcanP55066 Gm37114-201ENSMUST00000195065 1804 ntBASIC6.32□□□□□ -1.4
NcanP55066 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
NcanP55066 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NcanP55066 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
NcanP55066 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
NcanP55066 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
NcanP55066 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
NcanP55066 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NcanP55066 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
NcanP55066 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms