Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Glod4-206ENSMUST00000169701 4203 ntTSL 2 BASIC7.91□□□□□ -1.14
Col18a1P39061 AL591843.1-201ENSMUST00000223686 3082 ntBASIC7.91□□□□□ -1.14
Col18a1P39061 Pogz-205ENSMUST00000107270 6399 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
Col18a1P39061 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Col18a1P39061 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Col18a1P39061 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC7.91□□□□□ -1.14
Col18a1P39061 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC7.91□□□□□ -1.14
Col18a1P39061 Ctnnd1-203ENSMUST00000067232 6119 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Col18a1P39061 Tcf20-202ENSMUST00000109510 7347 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Col18a1P39061 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Col18a1P39061 Gm37474-201ENSMUST00000194812 1814 ntBASIC7.91□□□□□ -1.14
Col18a1P39061 Gm14158-201ENSMUST00000118409 308 ntBASIC7.91□□□□□ -1.14
Col18a1P39061 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC7.91□□□□□ -1.14
Col18a1P39061 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC7.91□□□□□ -1.14
Col18a1P39061 Gm26401-201ENSMUST00000158502 76 ntBASIC7.91□□□□□ -1.14
Col18a1P39061 Gm3242-201ENSMUST00000171273 485 ntBASIC7.91□□□□□ -1.14
Col18a1P39061 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC7.91□□□□□ -1.14
Col18a1P39061 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Col18a1P39061 Gm18150-201ENSMUST00000195341 645 ntBASIC7.91□□□□□ -1.14
Col18a1P39061 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC7.91□□□□□ -1.14
Col18a1P39061 Gm43524-201ENSMUST00000197278 298 ntBASIC7.91□□□□□ -1.14
Col18a1P39061 Gm4874-201ENSMUST00000203589 691 ntBASIC7.91□□□□□ -1.14
Col18a1P39061 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Col18a1P39061 Gm45608-201ENSMUST00000210948 389 ntBASIC7.91□□□□□ -1.14
Col18a1P39061 Gm19168-201ENSMUST00000218804 1091 ntBASIC7.91□□□□□ -1.14
Col18a1P39061 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Col18a1P39061 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Col18a1P39061 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Col18a1P39061 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Col18a1P39061 Gm24405-201ENSMUST00000083033 167 ntBASIC7.91□□□□□ -1.14
Col18a1P39061 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Col18a1P39061 Kdm4c-201ENSMUST00000030102 4196 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Col18a1P39061 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC7.91□□□□□ -1.14
Col18a1P39061 Arid5b-204ENSMUST00000219238 7581 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Col18a1P39061 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Col18a1P39061 Ank1-213ENSMUST00000141784 6566 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
Col18a1P39061 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Col18a1P39061 Gm13083-201ENSMUST00000105773 2464 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
Col18a1P39061 Abca17-201ENSMUST00000039324 5202 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Col18a1P39061 Gm43483-201ENSMUST00000196724 2860 ntBASIC7.9□□□□□ -1.14
Col18a1P39061 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Col18a1P39061 Qrich2-204ENSMUST00000208602 7260 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
Col18a1P39061 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Col18a1P39061 Lama3-202ENSMUST00000188815 5551 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Col18a1P39061 Smpd4-204ENSMUST00000163476 4532 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Col18a1P39061 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
Col18a1P39061 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Col18a1P39061 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC7.9□□□□□ -1.14
Col18a1P39061 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
Col18a1P39061 Gm15754-201ENSMUST00000119191 478 ntBASIC7.9□□□□□ -1.14
Col18a1P39061 Gm11896-201ENSMUST00000121105 820 ntBASIC7.9□□□□□ -1.14
Col18a1P39061 Gm23211-201ENSMUST00000122717 308 ntBASIC7.9□□□□□ -1.14
Col18a1P39061 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC7.9□□□□□ -1.14
Col18a1P39061 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC7.9□□□□□ -1.14
Col18a1P39061 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC7.9□□□□□ -1.14
Col18a1P39061 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC7.9□□□□□ -1.14
Col18a1P39061 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC7.9□□□□□ -1.14
Col18a1P39061 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC7.9□□□□□ -1.14
Col18a1P39061 Gm44128-201ENSMUST00000204909 219 ntBASIC7.9□□□□□ -1.14
Col18a1P39061 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC7.9□□□□□ -1.14
Col18a1P39061 Gm45731-201ENSMUST00000211988 1203 ntBASIC7.9□□□□□ -1.14
Col18a1P39061 AC161114.1-201ENSMUST00000218223 474 ntBASIC7.9□□□□□ -1.14
Col18a1P39061 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC7.9□□□□□ -1.14
Col18a1P39061 AC157654.1-201ENSMUST00000224130 820 ntBASIC7.9□□□□□ -1.14
Col18a1P39061 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Col18a1P39061 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
Col18a1P39061 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC7.9□□□□□ -1.14
Col18a1P39061 Gm21036-201ENSMUST00000207544 2611 ntBASIC7.9□□□□□ -1.14
Col18a1P39061 Hecw2-201ENSMUST00000087659 11171 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
Col18a1P39061 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
Col18a1P39061 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.15
Col18a1P39061 Daam1-205ENSMUST00000223272 5835 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.15
Col18a1P39061 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.15
Col18a1P39061 Col12a1-202ENSMUST00000121227 9953 ntTSL 5 BASIC7.9□□□□□ -1.15
Col18a1P39061 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
Col18a1P39061 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC7.9□□□□□ -1.15
Col18a1P39061 Mre11a-202ENSMUST00000115632 5660 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
Col18a1P39061 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.15
Col18a1P39061 Shprh-203ENSMUST00000159541 6679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.15
Col18a1P39061 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.15
Col18a1P39061 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.15
Col18a1P39061 Gm11743-201ENSMUST00000117385 1735 ntBASIC7.89□□□□□ -1.15
Col18a1P39061 Gm25317-201ENSMUST00000116824 129 ntBASIC7.89□□□□□ -1.15
Col18a1P39061 Gm14755-201ENSMUST00000118037 384 ntBASIC7.89□□□□□ -1.15
Col18a1P39061 Gm14472-201ENSMUST00000119815 282 ntBASIC7.89□□□□□ -1.15
Col18a1P39061 Gm25102-201ENSMUST00000122479 112 ntBASIC7.89□□□□□ -1.15
Col18a1P39061 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC7.89□□□□□ -1.15
Col18a1P39061 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC7.89□□□□□ -1.15
Col18a1P39061 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC7.89□□□□□ -1.15
Col18a1P39061 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Col18a1P39061 Gm37838-201ENSMUST00000194464 312 ntBASIC7.89□□□□□ -1.15
Col18a1P39061 Gm43841-201ENSMUST00000199491 586 ntBASIC7.89□□□□□ -1.15
Col18a1P39061 Gm18100-201ENSMUST00000200897 452 ntBASIC7.89□□□□□ -1.15
Col18a1P39061 Gm43884-201ENSMUST00000204251 559 ntBASIC7.89□□□□□ -1.15
Col18a1P39061 Gm8290-201ENSMUST00000218202 477 ntBASIC7.89□□□□□ -1.15
Col18a1P39061 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Col18a1P39061 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Col18a1P39061 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC7.89□□□□□ -1.15
Col18a1P39061 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
Col18a1P39061 Baz2a-208ENSMUST00000220049 8443 ntAPPRIS P2 TSL 5 BASIC7.89□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms