Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Cdx1P18111 Gm19206-201ENSMUST00000186401 827 ntBASIC4.85□□□□□ -1.63
Cdx1P18111 Gm19086-201ENSMUST00000190772 665 ntBASIC4.85□□□□□ -1.63
Cdx1P18111 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC4.85□□□□□ -1.63
Cdx1P18111 Gm37073-201ENSMUST00000192469 1222 ntBASIC4.85□□□□□ -1.63
Cdx1P18111 Gm5694-201ENSMUST00000195648 641 ntBASIC4.85□□□□□ -1.63
Cdx1P18111 Gm43689-201ENSMUST00000195951 427 ntBASIC4.85□□□□□ -1.63
Cdx1P18111 Gm42776-201ENSMUST00000198031 406 ntBASIC4.85□□□□□ -1.63
Cdx1P18111 Gm2926-201ENSMUST00000205625 239 ntBASIC4.85□□□□□ -1.63
Cdx1P18111 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Cdx1P18111 Gm17997-201ENSMUST00000211801 840 ntBASIC4.85□□□□□ -1.63
Cdx1P18111 Gm45899-201ENSMUST00000212196 1276 ntBASIC4.85□□□□□ -1.63
Cdx1P18111 Gm21112-201ENSMUST00000212224 578 ntBASIC4.85□□□□□ -1.63
Cdx1P18111 Gm7760-201ENSMUST00000212265 578 ntBASIC4.85□□□□□ -1.63
Cdx1P18111 Gm7807-201ENSMUST00000212475 578 ntBASIC4.85□□□□□ -1.63
Cdx1P18111 AC115793.1-201ENSMUST00000216605 215 ntBASIC4.85□□□□□ -1.63
Cdx1P18111 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC4.85□□□□□ -1.63
Cdx1P18111 Olfr809-203ENSMUST00000218237 1100 ntBASIC4.85□□□□□ -1.63
Cdx1P18111 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC4.85□□□□□ -1.63
Cdx1P18111 Gm18405-201ENSMUST00000220743 511 ntBASIC4.85□□□□□ -1.63
Cdx1P18111 AC122327.2-201ENSMUST00000220883 120 ntBASIC4.85□□□□□ -1.63
Cdx1P18111 Gm9237-201ENSMUST00000221499 548 ntBASIC4.85□□□□□ -1.63
Cdx1P18111 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC4.85□□□□□ -1.63
Cdx1P18111 AC122327.3-201ENSMUST00000221852 120 ntBASIC4.85□□□□□ -1.63
Cdx1P18111 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC4.85□□□□□ -1.63
Cdx1P18111 AC166341.1-201ENSMUST00000223360 105 ntBASIC4.85□□□□□ -1.63
Cdx1P18111 CT030254.1-201ENSMUST00000225450 1078 ntBASIC4.85□□□□□ -1.63
Cdx1P18111 AC154806.1-203ENSMUST00000227370 1032 ntBASIC4.85□□□□□ -1.63
Cdx1P18111 AC156016.2-201ENSMUST00000228200 525 ntBASIC4.85□□□□□ -1.63
Cdx1P18111 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Cdx1P18111 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Cdx1P18111 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Cdx1P18111 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Cdx1P18111 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Cdx1P18111 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Cdx1P18111 Gm43029-201ENSMUST00000201829 1535 ntBASIC4.85□□□□□ -1.63
Cdx1P18111 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Cdx1P18111 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Cdx1P18111 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Cdx1P18111 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
Cdx1P18111 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Cdx1P18111 Gm3978-201ENSMUST00000163406 2512 ntBASIC4.85□□□□□ -1.63
Cdx1P18111 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Cdx1P18111 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Cdx1P18111 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Cdx1P18111 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Cdx1P18111 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Cdx1P18111 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
Cdx1P18111 Gm42819-201ENSMUST00000199630 5121 ntBASIC4.85□□□□□ -1.63
Cdx1P18111 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
Cdx1P18111 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Cdx1P18111 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Cdx1P18111 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Cdx1P18111 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Cdx1P18111 Gm44242-201ENSMUST00000204212 2721 ntBASIC4.84□□□□□ -1.63
Cdx1P18111 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Cdx1P18111 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Cdx1P18111 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC4.84□□□□□ -1.63
Cdx1P18111 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
Cdx1P18111 Gm37049-201ENSMUST00000194356 1983 ntBASIC4.84□□□□□ -1.63
Cdx1P18111 AC107645.1-201ENSMUST00000228660 1810 ntBASIC4.84□□□□□ -1.63
Cdx1P18111 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Cdx1P18111 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Cdx1P18111 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC4.84□□□□□ -1.63
Cdx1P18111 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Cdx1P18111 Gm42671-201ENSMUST00000198013 1604 ntBASIC4.84□□□□□ -1.63
Cdx1P18111 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Cdx1P18111 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC4.84□□□□□ -1.63
Cdx1P18111 Gm12040-201ENSMUST00000118357 537 ntBASIC4.84□□□□□ -1.63
Cdx1P18111 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC4.84□□□□□ -1.63
Cdx1P18111 Gm14018-201ENSMUST00000119042 455 ntBASIC4.84□□□□□ -1.63
Cdx1P18111 Gm15801-201ENSMUST00000120920 522 ntBASIC4.84□□□□□ -1.63
Cdx1P18111 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC4.84□□□□□ -1.63
Cdx1P18111 Gm24477-201ENSMUST00000157438 103 ntBASIC4.84□□□□□ -1.63
Cdx1P18111 Gm23386-201ENSMUST00000158585 144 ntBASIC4.84□□□□□ -1.63
Cdx1P18111 Gm8783-201ENSMUST00000159764 522 ntBASIC4.84□□□□□ -1.63
Cdx1P18111 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Cdx1P18111 Gm23968-201ENSMUST00000175047 125 ntBASIC4.84□□□□□ -1.63
Cdx1P18111 Gm20615-201ENSMUST00000177503 705 ntBASIC4.84□□□□□ -1.63
Cdx1P18111 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC4.84□□□□□ -1.63
Cdx1P18111 Gm27152-201ENSMUST00000183828 99 ntBASIC4.84□□□□□ -1.63
Cdx1P18111 Gm8282-201ENSMUST00000187559 483 ntBASIC4.84□□□□□ -1.63
Cdx1P18111 Gm28507-201ENSMUST00000189737 703 ntBASIC4.84□□□□□ -1.63
Cdx1P18111 Gm28586-201ENSMUST00000189857 456 ntBASIC4.84□□□□□ -1.63
Cdx1P18111 Gm37503-201ENSMUST00000192088 319 ntBASIC4.84□□□□□ -1.63
Cdx1P18111 Gm37511-201ENSMUST00000192901 294 ntBASIC4.84□□□□□ -1.63
Cdx1P18111 Gm37720-201ENSMUST00000195497 1241 ntBASIC4.84□□□□□ -1.63
Cdx1P18111 Gm44571-201ENSMUST00000208092 533 ntBASIC4.84□□□□□ -1.63
Cdx1P18111 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC4.84□□□□□ -1.63
Cdx1P18111 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC4.84□□□□□ -1.63
Cdx1P18111 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Cdx1P18111 Gm38574-201ENSMUST00000211855 640 ntBASIC4.84□□□□□ -1.63
Cdx1P18111 Gm45722-201ENSMUST00000213075 466 ntBASIC4.84□□□□□ -1.63
Cdx1P18111 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC4.84□□□□□ -1.63
Cdx1P18111 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC4.84□□□□□ -1.63
Cdx1P18111 AC154861.1-201ENSMUST00000223767 800 ntBASIC4.84□□□□□ -1.63
Cdx1P18111 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Cdx1P18111 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Cdx1P18111 Gm5582-201ENSMUST00000075251 522 ntBASIC4.84□□□□□ -1.63
Cdx1P18111 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms