Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Cchcr1Q8K2I2 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Cchcr1Q8K2I2 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Cchcr1Q8K2I2 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC6.78□□□□□ -1.32
Cchcr1Q8K2I2 Gm12890-201ENSMUST00000120885 373 ntBASIC6.78□□□□□ -1.32
Cchcr1Q8K2I2 Gm12494-201ENSMUST00000121684 521 ntBASIC6.78□□□□□ -1.32
Cchcr1Q8K2I2 Gm12732-201ENSMUST00000121688 180 ntBASIC6.78□□□□□ -1.32
Cchcr1Q8K2I2 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Cchcr1Q8K2I2 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC6.78□□□□□ -1.32
Cchcr1Q8K2I2 Gm8032-201ENSMUST00000171009 574 ntBASIC6.78□□□□□ -1.32
Cchcr1Q8K2I2 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC6.78□□□□□ -1.32
Cchcr1Q8K2I2 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC6.78□□□□□ -1.32
Cchcr1Q8K2I2 Gm28586-201ENSMUST00000189857 456 ntBASIC6.78□□□□□ -1.32
Cchcr1Q8K2I2 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Cchcr1Q8K2I2 Gm1969-201ENSMUST00000198125 1220 ntBASIC6.78□□□□□ -1.32
Cchcr1Q8K2I2 Gm42961-201ENSMUST00000202023 181 ntBASIC6.78□□□□□ -1.32
Cchcr1Q8K2I2 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC6.78□□□□□ -1.32
Cchcr1Q8K2I2 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC6.78□□□□□ -1.32
Cchcr1Q8K2I2 AC152394.2-202ENSMUST00000228503 1064 ntBASIC6.78□□□□□ -1.32
Cchcr1Q8K2I2 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Cchcr1Q8K2I2 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Cchcr1Q8K2I2 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Cchcr1Q8K2I2 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Cchcr1Q8K2I2 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Cchcr1Q8K2I2 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Cchcr1Q8K2I2 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Cchcr1Q8K2I2 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Cchcr1Q8K2I2 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC6.78□□□□□ -1.32
Cchcr1Q8K2I2 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Cchcr1Q8K2I2 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Cchcr1Q8K2I2 AC122357.3-201ENSMUST00000221260 2293 ntBASIC6.78□□□□□ -1.32
Cchcr1Q8K2I2 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Cchcr1Q8K2I2 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.32
Cchcr1Q8K2I2 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Cchcr1Q8K2I2 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC6.77□□□□□ -1.33
Cchcr1Q8K2I2 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC6.77□□□□□ -1.33
Cchcr1Q8K2I2 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC6.77□□□□□ -1.33
Cchcr1Q8K2I2 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC6.77□□□□□ -1.33
Cchcr1Q8K2I2 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Cchcr1Q8K2I2 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Cchcr1Q8K2I2 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Cchcr1Q8K2I2 Gm23440-201ENSMUST00000104299 130 ntBASIC6.77□□□□□ -1.33
Cchcr1Q8K2I2 Gm22371-201ENSMUST00000104588 130 ntBASIC6.77□□□□□ -1.33
Cchcr1Q8K2I2 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Cchcr1Q8K2I2 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC6.77□□□□□ -1.33
Cchcr1Q8K2I2 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC6.77□□□□□ -1.33
Cchcr1Q8K2I2 Gm26069-201ENSMUST00000157497 277 ntBASIC6.77□□□□□ -1.33
Cchcr1Q8K2I2 Gm22160-201ENSMUST00000158405 328 ntBASIC6.77□□□□□ -1.33
Cchcr1Q8K2I2 Gm15257-201ENSMUST00000177680 883 ntBASIC6.77□□□□□ -1.33
Cchcr1Q8K2I2 Gm15252-201ENSMUST00000177750 883 ntBASIC6.77□□□□□ -1.33
Cchcr1Q8K2I2 Gm15256-201ENSMUST00000177793 883 ntBASIC6.77□□□□□ -1.33
Cchcr1Q8K2I2 Gm15260-201ENSMUST00000179402 883 ntBASIC6.77□□□□□ -1.33
Cchcr1Q8K2I2 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC6.77□□□□□ -1.33
Cchcr1Q8K2I2 Gm43105-201ENSMUST00000202987 459 ntBASIC6.77□□□□□ -1.33
Cchcr1Q8K2I2 Gm43946-201ENSMUST00000204058 886 ntBASIC6.77□□□□□ -1.33
Cchcr1Q8K2I2 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC6.77□□□□□ -1.33
Cchcr1Q8K2I2 Gm44809-201ENSMUST00000208305 993 ntBASIC6.77□□□□□ -1.33
Cchcr1Q8K2I2 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC6.77□□□□□ -1.33
Cchcr1Q8K2I2 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC6.77□□□□□ -1.33
Cchcr1Q8K2I2 AC124826.1-201ENSMUST00000221651 325 ntBASIC6.77□□□□□ -1.33
Cchcr1Q8K2I2 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Cchcr1Q8K2I2 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Cchcr1Q8K2I2 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Cchcr1Q8K2I2 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Cchcr1Q8K2I2 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Cchcr1Q8K2I2 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Cchcr1Q8K2I2 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC6.77□□□□□ -1.33
Cchcr1Q8K2I2 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Cchcr1Q8K2I2 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Cchcr1Q8K2I2 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Cchcr1Q8K2I2 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Cchcr1Q8K2I2 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
Cchcr1Q8K2I2 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Cchcr1Q8K2I2 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
Cchcr1Q8K2I2 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Cchcr1Q8K2I2 AC121942.1-201ENSMUST00000224459 2891 ntBASIC6.76□□□□□ -1.33
Cchcr1Q8K2I2 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Cchcr1Q8K2I2 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
Cchcr1Q8K2I2 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC6.76□□□□□ -1.33
Cchcr1Q8K2I2 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC6.76□□□□□ -1.33
Cchcr1Q8K2I2 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Cchcr1Q8K2I2 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Cchcr1Q8K2I2 Gm11369-201ENSMUST00000120812 318 ntBASIC6.76□□□□□ -1.33
Cchcr1Q8K2I2 Gm23995-201ENSMUST00000158060 129 ntBASIC6.76□□□□□ -1.33
Cchcr1Q8K2I2 Gm24179-201ENSMUST00000158925 127 ntBASIC6.76□□□□□ -1.33
Cchcr1Q8K2I2 Gm17366-201ENSMUST00000167629 187 ntBASIC6.76□□□□□ -1.33
Cchcr1Q8K2I2 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC6.76□□□□□ -1.33
Cchcr1Q8K2I2 Gm6223-201ENSMUST00000178436 871 ntBASIC6.76□□□□□ -1.33
Cchcr1Q8K2I2 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Cchcr1Q8K2I2 Gm28934-201ENSMUST00000186491 346 ntBASIC6.76□□□□□ -1.33
Cchcr1Q8K2I2 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Cchcr1Q8K2I2 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC6.76□□□□□ -1.33
Cchcr1Q8K2I2 AC099760.1-201ENSMUST00000196300 153 ntBASIC6.76□□□□□ -1.33
Cchcr1Q8K2I2 Gm2602-201ENSMUST00000202112 571 ntBASIC6.76□□□□□ -1.33
Cchcr1Q8K2I2 Gm42646-201ENSMUST00000202233 914 ntBASIC6.76□□□□□ -1.33
Cchcr1Q8K2I2 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC6.76□□□□□ -1.33
Cchcr1Q8K2I2 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC6.76□□□□□ -1.33
Cchcr1Q8K2I2 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC6.76□□□□□ -1.33
Cchcr1Q8K2I2 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC6.76□□□□□ -1.33
Cchcr1Q8K2I2 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC6.76□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 351 ms