Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Trub1Q8C0D0 Gm12833-201ENSMUST00000136112 477 ntBASIC5.9□□□□□ -1.46
Trub1Q8C0D0 Gm24692-201ENSMUST00000157761 146 ntBASIC5.9□□□□□ -1.46
Trub1Q8C0D0 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Trub1Q8C0D0 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Trub1Q8C0D0 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Trub1Q8C0D0 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Trub1Q8C0D0 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Trub1Q8C0D0 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Trub1Q8C0D0 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Trub1Q8C0D0 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Trub1Q8C0D0 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Trub1Q8C0D0 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Trub1Q8C0D0 Gm26970-201ENSMUST00000182990 964 ntBASIC5.9□□□□□ -1.46
Trub1Q8C0D0 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC5.9□□□□□ -1.46
Trub1Q8C0D0 Gm27219-201ENSMUST00000184633 742 ntBASIC5.9□□□□□ -1.46
Trub1Q8C0D0 Gm21654-201ENSMUST00000188086 691 ntBASIC5.9□□□□□ -1.46
Trub1Q8C0D0 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC5.9□□□□□ -1.46
Trub1Q8C0D0 Gm38185-201ENSMUST00000193195 694 ntBASIC5.9□□□□□ -1.46
Trub1Q8C0D0 Gm44360-201ENSMUST00000200081 82 ntBASIC5.9□□□□□ -1.46
Trub1Q8C0D0 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC5.9□□□□□ -1.46
Trub1Q8C0D0 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
Trub1Q8C0D0 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Trub1Q8C0D0 AC124709.3-201ENSMUST00000227294 171 ntBASIC5.9□□□□□ -1.46
Trub1Q8C0D0 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Trub1Q8C0D0 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Trub1Q8C0D0 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Trub1Q8C0D0 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Trub1Q8C0D0 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Trub1Q8C0D0 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Trub1Q8C0D0 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Trub1Q8C0D0 Gm45311-201ENSMUST00000211086 1330 ntBASIC5.9□□□□□ -1.47
Trub1Q8C0D0 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.47
Trub1Q8C0D0 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Trub1Q8C0D0 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Trub1Q8C0D0 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Trub1Q8C0D0 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Trub1Q8C0D0 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Trub1Q8C0D0 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Trub1Q8C0D0 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Trub1Q8C0D0 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Trub1Q8C0D0 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Trub1Q8C0D0 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trub1Q8C0D0 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC5.89□□□□□ -1.47
Trub1Q8C0D0 AC154354.1-201ENSMUST00000224585 2109 ntBASIC5.89□□□□□ -1.47
Trub1Q8C0D0 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
Trub1Q8C0D0 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trub1Q8C0D0 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC5.89□□□□□ -1.47
Trub1Q8C0D0 Gm13772-201ENSMUST00000118431 317 ntBASIC5.89□□□□□ -1.47
Trub1Q8C0D0 Gm12850-201ENSMUST00000119210 436 ntBASIC5.89□□□□□ -1.47
Trub1Q8C0D0 Gm7309-201ENSMUST00000121670 581 ntBASIC5.89□□□□□ -1.47
Trub1Q8C0D0 Gm14237-201ENSMUST00000122080 430 ntBASIC5.89□□□□□ -1.47
Trub1Q8C0D0 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Trub1Q8C0D0 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trub1Q8C0D0 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC5.89□□□□□ -1.47
Trub1Q8C0D0 Gm15740-201ENSMUST00000159703 1292 ntBASIC5.89□□□□□ -1.47
Trub1Q8C0D0 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC5.89□□□□□ -1.47
Trub1Q8C0D0 Gm7713-201ENSMUST00000181201 1007 ntBASIC5.89□□□□□ -1.47
Trub1Q8C0D0 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Trub1Q8C0D0 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC5.89□□□□□ -1.47
Trub1Q8C0D0 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Trub1Q8C0D0 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Trub1Q8C0D0 Gm37024-201ENSMUST00000192224 868 ntBASIC5.89□□□□□ -1.47
Trub1Q8C0D0 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC5.89□□□□□ -1.47
Trub1Q8C0D0 Gm42640-201ENSMUST00000199792 1195 ntBASIC5.89□□□□□ -1.47
Trub1Q8C0D0 Gm31861-201ENSMUST00000204563 672 ntBASIC5.89□□□□□ -1.47
Trub1Q8C0D0 Gm7499-201ENSMUST00000210423 813 ntBASIC5.89□□□□□ -1.47
Trub1Q8C0D0 CT025686.1-201ENSMUST00000227592 438 ntBASIC5.89□□□□□ -1.47
Trub1Q8C0D0 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trub1Q8C0D0 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Trub1Q8C0D0 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Trub1Q8C0D0 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Trub1Q8C0D0 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Trub1Q8C0D0 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Trub1Q8C0D0 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trub1Q8C0D0 Gm42531-201ENSMUST00000201648 4048 ntBASIC5.89□□□□□ -1.47
Trub1Q8C0D0 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trub1Q8C0D0 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Trub1Q8C0D0 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Trub1Q8C0D0 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Trub1Q8C0D0 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trub1Q8C0D0 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trub1Q8C0D0 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC5.89□□□□□ -1.47
Trub1Q8C0D0 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC5.89□□□□□ -1.47
Trub1Q8C0D0 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC5.89□□□□□ -1.47
Trub1Q8C0D0 AC162908.1-201ENSMUST00000219164 4563 ntBASIC5.89□□□□□ -1.47
Trub1Q8C0D0 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trub1Q8C0D0 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trub1Q8C0D0 Gm11290-204ENSMUST00000224688 3042 ntBASIC5.88□□□□□ -1.47
Trub1Q8C0D0 Gm42998-201ENSMUST00000197053 2371 ntBASIC5.88□□□□□ -1.47
Trub1Q8C0D0 AL591843.1-201ENSMUST00000223686 3082 ntBASIC5.88□□□□□ -1.47
Trub1Q8C0D0 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Trub1Q8C0D0 Gm44829-201ENSMUST00000208008 3193 ntBASIC5.88□□□□□ -1.47
Trub1Q8C0D0 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Trub1Q8C0D0 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trub1Q8C0D0 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trub1Q8C0D0 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC5.88□□□□□ -1.47
Trub1Q8C0D0 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trub1Q8C0D0 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC5.88□□□□□ -1.47
Trub1Q8C0D0 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC5.88□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 110.4 ms