Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Scrt1Q99M85 Gm44043-201ENSMUST00000203426 3253 ntBASIC5.22□□□□□ -1.57
Scrt1Q99M85 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC5.22□□□□□ -1.57
Scrt1Q99M85 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Scrt1Q99M85 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC5.22□□□□□ -1.57
Scrt1Q99M85 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Scrt1Q99M85 Gm44697-201ENSMUST00000207756 1679 ntBASIC5.21□□□□□ -1.57
Scrt1Q99M85 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC5.21□□□□□ -1.57
Scrt1Q99M85 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Scrt1Q99M85 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Scrt1Q99M85 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
Scrt1Q99M85 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Scrt1Q99M85 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Scrt1Q99M85 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Scrt1Q99M85 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Scrt1Q99M85 Gm37864-201ENSMUST00000195308 3075 ntBASIC5.21□□□□□ -1.58
Scrt1Q99M85 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Scrt1Q99M85 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Scrt1Q99M85 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Scrt1Q99M85 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Scrt1Q99M85 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Scrt1Q99M85 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Scrt1Q99M85 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Scrt1Q99M85 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Scrt1Q99M85 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Scrt1Q99M85 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Scrt1Q99M85 Mir1188-201ENSMUST00000116756 120 ntBASIC5.21□□□□□ -1.58
Scrt1Q99M85 Gm15531-201ENSMUST00000118062 252 ntBASIC5.21□□□□□ -1.58
Scrt1Q99M85 Gm14520-201ENSMUST00000119258 387 ntBASIC5.21□□□□□ -1.58
Scrt1Q99M85 Gm13818-201ENSMUST00000119441 511 ntBASIC5.21□□□□□ -1.58
Scrt1Q99M85 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Scrt1Q99M85 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC5.21□□□□□ -1.58
Scrt1Q99M85 Gm22094-201ENSMUST00000158976 117 ntBASIC5.21□□□□□ -1.58
Scrt1Q99M85 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
Scrt1Q99M85 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Scrt1Q99M85 Gm27985-201ENSMUST00000185112 378 ntBASIC5.21□□□□□ -1.58
Scrt1Q99M85 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Scrt1Q99M85 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
Scrt1Q99M85 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
Scrt1Q99M85 Gm19256-201ENSMUST00000218550 231 ntBASIC5.21□□□□□ -1.58
Scrt1Q99M85 Gm8613-201ENSMUST00000220383 1077 ntBASIC5.21□□□□□ -1.58
Scrt1Q99M85 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC5.21□□□□□ -1.58
Scrt1Q99M85 Gm18628-201ENSMUST00000220584 475 ntBASIC5.21□□□□□ -1.58
Scrt1Q99M85 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Scrt1Q99M85 AC211878.1-201ENSMUST00000221668 474 ntBASIC5.21□□□□□ -1.58
Scrt1Q99M85 AC164164.2-201ENSMUST00000221809 785 ntBASIC5.21□□□□□ -1.58
Scrt1Q99M85 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC5.21□□□□□ -1.58
Scrt1Q99M85 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Scrt1Q99M85 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC5.21□□□□□ -1.58
Scrt1Q99M85 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC5.21□□□□□ -1.58
Scrt1Q99M85 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Scrt1Q99M85 Gm43088-201ENSMUST00000197530 2347 ntBASIC5.21□□□□□ -1.58
Scrt1Q99M85 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC5.21□□□□□ -1.58
Scrt1Q99M85 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Scrt1Q99M85 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Scrt1Q99M85 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC5.21□□□□□ -1.58
Scrt1Q99M85 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Scrt1Q99M85 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Scrt1Q99M85 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Scrt1Q99M85 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Scrt1Q99M85 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Scrt1Q99M85 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Scrt1Q99M85 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
Scrt1Q99M85 Gm4954-201ENSMUST00000135069 1601 ntBASIC5.2□□□□□ -1.58
Scrt1Q99M85 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Scrt1Q99M85 Gm37238-201ENSMUST00000195552 2390 ntBASIC5.2□□□□□ -1.58
Scrt1Q99M85 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Scrt1Q99M85 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Scrt1Q99M85 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Scrt1Q99M85 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Scrt1Q99M85 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Scrt1Q99M85 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC5.2□□□□□ -1.58
Scrt1Q99M85 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC5.2□□□□□ -1.58
Scrt1Q99M85 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Scrt1Q99M85 AC156025.2-201ENSMUST00000225907 1533 ntBASIC5.2□□□□□ -1.58
Scrt1Q99M85 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Scrt1Q99M85 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Scrt1Q99M85 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Scrt1Q99M85 Gm22676-201ENSMUST00000116972 129 ntBASIC5.2□□□□□ -1.58
Scrt1Q99M85 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Scrt1Q99M85 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC5.2□□□□□ -1.58
Scrt1Q99M85 Gm16200-201ENSMUST00000120385 331 ntBASIC5.2□□□□□ -1.58
Scrt1Q99M85 Gm8545-201ENSMUST00000120692 801 ntBASIC5.2□□□□□ -1.58
Scrt1Q99M85 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC5.2□□□□□ -1.58
Scrt1Q99M85 Gm12396-201ENSMUST00000121600 306 ntBASIC5.2□□□□□ -1.58
Scrt1Q99M85 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC5.2□□□□□ -1.58
Scrt1Q99M85 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC5.2□□□□□ -1.58
Scrt1Q99M85 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC5.2□□□□□ -1.58
Scrt1Q99M85 Gm22885-201ENSMUST00000157410 107 ntBASIC5.2□□□□□ -1.58
Scrt1Q99M85 Gm26372-201ENSMUST00000157831 236 ntBASIC5.2□□□□□ -1.58
Scrt1Q99M85 Mir1970-201ENSMUST00000157839 104 ntBASIC5.2□□□□□ -1.58
Scrt1Q99M85 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Scrt1Q99M85 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC5.2□□□□□ -1.58
Scrt1Q99M85 Mir5103-201ENSMUST00000175111 79 ntBASIC5.2□□□□□ -1.58
Scrt1Q99M85 Gm5139-201ENSMUST00000175943 249 ntBASIC5.2□□□□□ -1.58
Scrt1Q99M85 Gm27225-201ENSMUST00000183833 557 ntBASIC5.2□□□□□ -1.58
Scrt1Q99M85 Gm18117-201ENSMUST00000187720 742 ntBASIC5.2□□□□□ -1.58
Scrt1Q99M85 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC5.2□□□□□ -1.58
Scrt1Q99M85 Gm37235-201ENSMUST00000195171 59 ntBASIC5.2□□□□□ -1.58
Scrt1Q99M85 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC5.2□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms