Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Svs2-202ENSMUST00000109374 1479 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Gm44242-201ENSMUST00000204212 2721 ntBASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Lsm1Q8VC85 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC5.6□□□□□ -1.51
Lsm1Q8VC85 AC130827.1-201ENSMUST00000220476 3850 ntBASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Gm25795-201ENSMUST00000104421 132 ntBASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Gm22499-201ENSMUST00000104501 135 ntBASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Gm25345-201ENSMUST00000104505 133 ntBASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Gm15493-201ENSMUST00000119461 528 ntBASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Gm8722-201ENSMUST00000121466 769 ntBASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Gm24363-201ENSMUST00000158440 311 ntBASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Gm15740-201ENSMUST00000159703 1292 ntBASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Gm20778-201ENSMUST00000178524 627 ntBASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Gm28883-201ENSMUST00000189256 369 ntBASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Gm18444-201ENSMUST00000191239 629 ntBASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Ighv5-19-201ENSMUST00000193466 297 ntBASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Gm5694-201ENSMUST00000195648 641 ntBASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC5.6□□□□□ -1.51
Lsm1Q8VC85 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Gm42640-201ENSMUST00000199792 1195 ntBASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Gm43849-201ENSMUST00000201086 215 ntBASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Gm8291-201ENSMUST00000209635 1261 ntBASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Gm8523-201ENSMUST00000211386 552 ntBASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Gm37212-201ENSMUST00000192582 3650 ntBASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Gm37238-201ENSMUST00000195552 2390 ntBASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Lsm1Q8VC85 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Gm16270-201ENSMUST00000160327 3238 ntBASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Lsm1Q8VC85 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Lsm1Q8VC85 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Lsm1Q8VC85 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Lsm1Q8VC85 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Lsm1Q8VC85 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Lsm1Q8VC85 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
Lsm1Q8VC85 AC159896.3-201ENSMUST00000215904 3835 ntBASIC5.59□□□□□ -1.51
Lsm1Q8VC85 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Lsm1Q8VC85 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Lsm1Q8VC85 Gm38137-201ENSMUST00000193735 1401 ntBASIC5.59□□□□□ -1.51
Lsm1Q8VC85 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Lsm1Q8VC85 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Lsm1Q8VC85 Gm8853-201ENSMUST00000198366 1344 ntBASIC5.59□□□□□ -1.51
Lsm1Q8VC85 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Lsm1Q8VC85 Gm24272-201ENSMUST00000102329 98 ntBASIC5.59□□□□□ -1.51
Lsm1Q8VC85 Gm24434-201ENSMUST00000104081 132 ntBASIC5.59□□□□□ -1.51
Lsm1Q8VC85 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Lsm1Q8VC85 Gm13641-201ENSMUST00000117993 473 ntBASIC5.59□□□□□ -1.51
Lsm1Q8VC85 Gm11624-201ENSMUST00000118579 1041 ntBASIC5.59□□□□□ -1.51
Lsm1Q8VC85 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC5.59□□□□□ -1.51
Lsm1Q8VC85 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC5.59□□□□□ -1.51
Lsm1Q8VC85 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Lsm1Q8VC85 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC5.59□□□□□ -1.51
Lsm1Q8VC85 Gm43233-201ENSMUST00000200491 616 ntBASIC5.59□□□□□ -1.51
Lsm1Q8VC85 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Lsm1Q8VC85 Gm45724-201ENSMUST00000213031 420 ntBASIC5.59□□□□□ -1.51
Lsm1Q8VC85 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Lsm1Q8VC85 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC5.59□□□□□ -1.51
Lsm1Q8VC85 CT485612.1-201ENSMUST00000222555 382 ntBASIC5.59□□□□□ -1.51
Lsm1Q8VC85 Gm8256-203ENSMUST00000228692 591 ntBASIC5.59□□□□□ -1.51
Lsm1Q8VC85 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Lsm1Q8VC85 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Lsm1Q8VC85 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
Lsm1Q8VC85 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Lsm1Q8VC85 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Lsm1Q8VC85 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
Lsm1Q8VC85 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Lsm1Q8VC85 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Lsm1Q8VC85 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Lsm1Q8VC85 Gm42492-201ENSMUST00000195780 2915 ntBASIC5.59□□□□□ -1.51
Lsm1Q8VC85 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Lsm1Q8VC85 Gm8822-201ENSMUST00000118948 2347 ntBASIC5.59□□□□□ -1.51
Lsm1Q8VC85 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Lsm1Q8VC85 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
Lsm1Q8VC85 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Lsm1Q8VC85 Gm44586-201ENSMUST00000207166 2737 ntBASIC5.59□□□□□ -1.52
Lsm1Q8VC85 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 97 ms