Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Clasp1-206ENSMUST00000186349 7281 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Trim35Q8C006 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC8.85□□□□□ -0.99
Trim35Q8C006 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim35Q8C006 Gm38009-201ENSMUST00000194884 3341 ntBASIC8.85□□□□□ -0.99
Trim35Q8C006 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC8.85□□□□□ -0.99
Trim35Q8C006 Gm44708-201ENSMUST00000205580 2237 ntBASIC8.85□□□□□ -0.99
Trim35Q8C006 Impa1-201ENSMUST00000065938 4185 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim35Q8C006 5430403N17Rik-201ENSMUST00000210717 2553 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trim35Q8C006 Ptprr-201ENSMUST00000063470 3619 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim35Q8C006 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim35Q8C006 Gm37983-201ENSMUST00000193207 2006 ntBASIC8.85□□□□□ -0.99
Trim35Q8C006 Nt5dc1-201ENSMUST00000047885 2743 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim35Q8C006 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC8.85□□□□□ -0.99
Trim35Q8C006 Gm44860-201ENSMUST00000208473 2346 ntBASIC8.85□□□□□ -0.99
Trim35Q8C006 Fam45a-201ENSMUST00000025957 2307 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim35Q8C006 Pappa2-202ENSMUST00000159861 9518 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Trim35Q8C006 Ddx6-201ENSMUST00000170489 6065 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Trim35Q8C006 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Trim35Q8C006 Igkv4-58-201ENSMUST00000103355 292 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Trim35Q8C006 Gm24985-201ENSMUST00000104455 129 ntBASIC8.85□□□□□ -0.99
Trim35Q8C006 Gm41-201ENSMUST00000116183 1023 ntBASIC8.85□□□□□ -0.99
Trim35Q8C006 Gm15368-201ENSMUST00000120438 858 ntBASIC8.85□□□□□ -0.99
Trim35Q8C006 Gm12751-201ENSMUST00000122336 381 ntBASIC8.85□□□□□ -0.99
Trim35Q8C006 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC8.85□□□□□ -0.99
Trim35Q8C006 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC8.85□□□□□ -0.99
Trim35Q8C006 Gm3326-201ENSMUST00000164656 1043 ntBASIC8.85□□□□□ -0.99
Trim35Q8C006 Sorbs1-204ENSMUST00000165469 2145 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Trim35Q8C006 Gm6673-201ENSMUST00000166114 700 ntBASIC8.85□□□□□ -0.99
Trim35Q8C006 Pax4-205ENSMUST00000174194 974 ntTSL 5 BASIC8.85□□□□□ -0.99
Trim35Q8C006 Gm21809-201ENSMUST00000178495 468 ntBASIC8.85□□□□□ -0.99
Trim35Q8C006 Gm21917-203ENSMUST00000180309 561 ntTSL 3 BASIC8.85□□□□□ -0.99
Trim35Q8C006 Gm21232-201ENSMUST00000182187 1006 ntBASIC8.85□□□□□ -0.99
Trim35Q8C006 Gm27913-201ENSMUST00000184473 173 ntBASIC8.85□□□□□ -0.99
Trim35Q8C006 Gm45060-201ENSMUST00000203293 593 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trim35Q8C006 Gm43968-201ENSMUST00000203388 389 ntBASIC8.85□□□□□ -0.99
Trim35Q8C006 Gm44279-201ENSMUST00000205154 472 ntBASIC8.85□□□□□ -0.99
Trim35Q8C006 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC8.85□□□□□ -0.99
Trim35Q8C006 4933407I05Rik-203ENSMUST00000214646 796 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trim35Q8C006 AC158603.2-201ENSMUST00000219191 315 ntBASIC8.85□□□□□ -0.99
Trim35Q8C006 Gm45925-202ENSMUST00000219904 1136 ntBASIC8.85□□□□□ -0.99
Trim35Q8C006 Gm18504-201ENSMUST00000220917 929 ntBASIC8.85□□□□□ -0.99
Trim35Q8C006 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC8.85□□□□□ -0.99
Trim35Q8C006 Fam166a-201ENSMUST00000028346 1125 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim35Q8C006 Ttc16-201ENSMUST00000066478 2979 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim35Q8C006 Adam9-201ENSMUST00000084032 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim35Q8C006 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC8.85□□□□□ -0.99
Trim35Q8C006 Wipf3-205ENSMUST00000163746 4102 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Trim35Q8C006 Sprr2a2-201ENSMUST00000071805 2867 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim35Q8C006 Ctnna1-201ENSMUST00000042345 3698 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim35Q8C006 Prdm11-202ENSMUST00000111274 11678 ntTSL 5 BASIC8.85□□□□□ -0.99
Trim35Q8C006 Ldb2-207ENSMUST00000199534 2541 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trim35Q8C006 Frmpd4-202ENSMUST00000112146 8153 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim35Q8C006 1700034I23Rik-201ENSMUST00000099123 2348 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Trim35Q8C006 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Trim35Q8C006 Kdm5a-201ENSMUST00000005108 10944 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Trim35Q8C006 Slco2b1-203ENSMUST00000107088 4369 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim35Q8C006 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC8.84□□□□□ -0.99
Trim35Q8C006 Setd5-202ENSMUST00000113155 6362 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trim35Q8C006 Bbs7-202ENSMUST00000108155 2437 ntTSL 5 BASIC8.84□□□□□ -0.99
Trim35Q8C006 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim35Q8C006 Pogz-204ENSMUST00000107269 5966 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Trim35Q8C006 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC8.84□□□□□ -0.99
Trim35Q8C006 Gm34730-201ENSMUST00000210674 4077 ntTSL 5 BASIC8.84□□□□□ -0.99
Trim35Q8C006 Ugt3a1-201ENSMUST00000022861 2244 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim35Q8C006 Gm37520-201ENSMUST00000194883 2672 ntBASIC8.84□□□□□ -0.99
Trim35Q8C006 Mcm7-201ENSMUST00000000505 2962 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim35Q8C006 Slc12a3-201ENSMUST00000034218 3299 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim35Q8C006 Zmym1-203ENSMUST00000106102 3852 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim35Q8C006 Trim66-202ENSMUST00000106739 9250 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trim35Q8C006 Gm22369-201ENSMUST00000102415 104 ntBASIC8.84□□□□□ -0.99
Trim35Q8C006 Gm23431-201ENSMUST00000104006 107 ntBASIC8.84□□□□□ -0.99
Trim35Q8C006 Gm8534-201ENSMUST00000118553 766 ntBASIC8.84□□□□□ -0.99
Trim35Q8C006 Rps8-ps2-201ENSMUST00000118709 624 ntBASIC8.84□□□□□ -0.99
Trim35Q8C006 Gm6275-201ENSMUST00000118971 1122 ntBASIC8.84□□□□□ -0.99
Trim35Q8C006 Gm7421-201ENSMUST00000119298 639 ntBASIC8.84□□□□□ -0.99
Trim35Q8C006 Gm11546-201ENSMUST00000120297 354 ntBASIC8.84□□□□□ -0.99
Trim35Q8C006 Gm7365-201ENSMUST00000120877 639 ntBASIC8.84□□□□□ -0.99
Trim35Q8C006 Gm12093-201ENSMUST00000120906 1405 ntBASIC8.84□□□□□ -0.99
Trim35Q8C006 Gm11829-201ENSMUST00000121003 282 ntBASIC8.84□□□□□ -0.99
Trim35Q8C006 Gm14438-201ENSMUST00000121572 624 ntBASIC8.84□□□□□ -0.99
Trim35Q8C006 4930519G04Rik-203ENSMUST00000134389 731 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim35Q8C006 Gm15637-201ENSMUST00000135544 817 ntTSL 3 BASIC8.84□□□□□ -0.99
Trim35Q8C006 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC8.84□□□□□ -0.99
Trim35Q8C006 Anp32e-207ENSMUST00000170125 413 ntTSL 3 BASIC8.84□□□□□ -0.99
Trim35Q8C006 Gm21842-201ENSMUST00000177552 498 ntBASIC8.84□□□□□ -0.99
Trim35Q8C006 Gm21626-201ENSMUST00000177791 498 ntBASIC8.84□□□□□ -0.99
Trim35Q8C006 Gm21562-201ENSMUST00000177888 498 ntBASIC8.84□□□□□ -0.99
Trim35Q8C006 Gm21539-201ENSMUST00000177925 498 ntBASIC8.84□□□□□ -0.99
Trim35Q8C006 Gm6176-201ENSMUST00000178209 906 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Trim35Q8C006 Gm21599-201ENSMUST00000178249 498 ntBASIC8.84□□□□□ -0.99
Trim35Q8C006 Gm21914-201ENSMUST00000178452 498 ntBASIC8.84□□□□□ -0.99
Trim35Q8C006 Gm4567-201ENSMUST00000178591 906 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Trim35Q8C006 Gm21723-201ENSMUST00000178692 498 ntBASIC8.84□□□□□ -0.99
Trim35Q8C006 Gm3252-202ENSMUST00000178748 450 ntTSL 5 BASIC8.84□□□□□ -0.99
Trim35Q8C006 Gm21916-201ENSMUST00000178771 498 ntBASIC8.84□□□□□ -0.99
Trim35Q8C006 Gm21801-201ENSMUST00000178865 498 ntBASIC8.84□□□□□ -0.99
Trim35Q8C006 Gm21633-201ENSMUST00000178941 498 ntBASIC8.84□□□□□ -0.99
Trim35Q8C006 Gm10668-201ENSMUST00000179491 906 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Trim35Q8C006 Gm21821-201ENSMUST00000179646 498 ntBASIC8.84□□□□□ -0.99
Trim35Q8C006 Gm21588-201ENSMUST00000180074 498 ntBASIC8.84□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms