Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm28969-211ENSMUST00000190992 615 ntBASIC6.71□□□□□ -1.34
Sox9Q04887 Gm28990-207ENSMUST00000191219 615 ntBASIC6.71□□□□□ -1.34
Sox9Q04887 Gm36468-201ENSMUST00000192119 615 ntBASIC6.71□□□□□ -1.34
Sox9Q04887 Gm37543-201ENSMUST00000192443 1031 ntBASIC6.71□□□□□ -1.34
Sox9Q04887 Gm36935-201ENSMUST00000192526 292 ntBASIC6.71□□□□□ -1.34
Sox9Q04887 Gm31572-201ENSMUST00000193341 615 ntBASIC6.71□□□□□ -1.34
Sox9Q04887 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC6.71□□□□□ -1.34
Sox9Q04887 Gm30175-201ENSMUST00000194173 615 ntBASIC6.71□□□□□ -1.34
Sox9Q04887 Gm30858-201ENSMUST00000195516 615 ntBASIC6.71□□□□□ -1.34
Sox9Q04887 Gm6057-201ENSMUST00000195927 314 ntBASIC6.71□□□□□ -1.34
Sox9Q04887 Gm35013-201ENSMUST00000197218 832 ntBASIC6.71□□□□□ -1.34
Sox9Q04887 Gm9480-201ENSMUST00000198038 616 ntBASIC6.71□□□□□ -1.34
Sox9Q04887 Igkv4-56-201ENSMUST00000198436 349 ntBASIC6.71□□□□□ -1.34
Sox9Q04887 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Sox9Q04887 Gm43550-201ENSMUST00000200597 303 ntBASIC6.71□□□□□ -1.34
Sox9Q04887 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC6.71□□□□□ -1.34
Sox9Q04887 Gm45008-201ENSMUST00000206420 493 ntBASIC6.71□□□□□ -1.34
Sox9Q04887 Gm17988-201ENSMUST00000208796 535 ntBASIC6.71□□□□□ -1.34
Sox9Q04887 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC6.71□□□□□ -1.34
Sox9Q04887 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Sox9Q04887 AC163660.1-201ENSMUST00000223696 818 ntBASIC6.71□□□□□ -1.34
Sox9Q04887 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC6.71□□□□□ -1.34
Sox9Q04887 CT030645.3-201ENSMUST00000225483 1022 ntBASIC6.71□□□□□ -1.34
Sox9Q04887 AC113198.1-201ENSMUST00000226353 832 ntBASIC6.71□□□□□ -1.34
Sox9Q04887 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Sox9Q04887 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Sox9Q04887 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Sox9Q04887 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC6.71□□□□□ -1.34
Sox9Q04887 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Sox9Q04887 CT025535.2-201ENSMUST00000228572 7441 ntBASIC6.71□□□□□ -1.34
Sox9Q04887 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Sox9Q04887 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC6.71□□□□□ -1.34
Sox9Q04887 Gm9923-201ENSMUST00000217785 1836 ntBASIC6.71□□□□□ -1.34
Sox9Q04887 Gm37169-201ENSMUST00000195599 4161 ntBASIC6.71□□□□□ -1.34
Sox9Q04887 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Sox9Q04887 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
Sox9Q04887 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Sox9Q04887 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Sox9Q04887 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
Sox9Q04887 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Sox9Q04887 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Sox9Q04887 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Sox9Q04887 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC6.7□□□□□ -1.34
Sox9Q04887 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Sox9Q04887 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Sox9Q04887 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Sox9Q04887 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Sox9Q04887 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Sox9Q04887 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Sox9Q04887 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Sox9Q04887 Gm11387-201ENSMUST00000120266 772 ntBASIC6.7□□□□□ -1.34
Sox9Q04887 Gm15237-201ENSMUST00000122104 469 ntBASIC6.7□□□□□ -1.34
Sox9Q04887 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC6.7□□□□□ -1.34
Sox9Q04887 Gm26086-201ENSMUST00000157902 263 ntBASIC6.7□□□□□ -1.34
Sox9Q04887 Gm26037-201ENSMUST00000158150 311 ntBASIC6.7□□□□□ -1.34
Sox9Q04887 Gm19840-201ENSMUST00000169624 882 ntBASIC6.7□□□□□ -1.34
Sox9Q04887 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC6.7□□□□□ -1.34
Sox9Q04887 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Sox9Q04887 Gm24957-201ENSMUST00000179604 132 ntBASIC6.7□□□□□ -1.34
Sox9Q04887 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC6.7□□□□□ -1.34
Sox9Q04887 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC6.7□□□□□ -1.34
Sox9Q04887 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Sox9Q04887 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC6.7□□□□□ -1.34
Sox9Q04887 Gm37996-201ENSMUST00000191859 367 ntBASIC6.7□□□□□ -1.34
Sox9Q04887 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC6.7□□□□□ -1.34
Sox9Q04887 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC6.7□□□□□ -1.34
Sox9Q04887 Gm38213-201ENSMUST00000193203 173 ntBASIC6.7□□□□□ -1.34
Sox9Q04887 Gm38360-201ENSMUST00000195130 454 ntBASIC6.7□□□□□ -1.34
Sox9Q04887 Gm42509-201ENSMUST00000197390 781 ntBASIC6.7□□□□□ -1.34
Sox9Q04887 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Sox9Q04887 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Sox9Q04887 Gm19065-202ENSMUST00000203910 1165 ntBASIC6.7□□□□□ -1.34
Sox9Q04887 Gm18215-201ENSMUST00000204429 798 ntBASIC6.7□□□□□ -1.34
Sox9Q04887 Gm8291-201ENSMUST00000209635 1261 ntBASIC6.7□□□□□ -1.34
Sox9Q04887 Gm18585-201ENSMUST00000215197 556 ntBASIC6.7□□□□□ -1.34
Sox9Q04887 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Sox9Q04887 AC132384.13-201ENSMUST00000219556 1159 ntBASIC6.7□□□□□ -1.34
Sox9Q04887 AC118230.1-201ENSMUST00000220196 656 ntBASIC6.7□□□□□ -1.34
Sox9Q04887 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC6.7□□□□□ -1.34
Sox9Q04887 AC134254.2-201ENSMUST00000221262 170 ntBASIC6.7□□□□□ -1.34
Sox9Q04887 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC6.7□□□□□ -1.34
Sox9Q04887 AC154452.1-201ENSMUST00000225819 241 ntBASIC6.7□□□□□ -1.34
Sox9Q04887 Mir129-2-201ENSMUST00000083577 90 ntBASIC6.7□□□□□ -1.34
Sox9Q04887 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Sox9Q04887 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Sox9Q04887 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC6.7□□□□□ -1.34
Sox9Q04887 Gm10693-201ENSMUST00000144146 2037 ntBASIC6.7□□□□□ -1.34
Sox9Q04887 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Sox9Q04887 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
Sox9Q04887 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Sox9Q04887 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC6.7□□□□□ -1.34
Sox9Q04887 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC6.7□□□□□ -1.34
Sox9Q04887 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Sox9Q04887 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Sox9Q04887 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Sox9Q04887 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Sox9Q04887 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Sox9Q04887 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Sox9Q04887 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Sox9Q04887 Gm12919-201ENSMUST00000119855 1594 ntBASIC6.69□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms