Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
Sec61a1P61620 Gm6884-201ENSMUST00000119318 615 ntBASIC5.3□□□□□ -1.56
Sec61a1P61620 Gm11485-201ENSMUST00000120048 1175 ntBASIC5.3□□□□□ -1.56
Sec61a1P61620 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sec61a1P61620 Gm23894-201ENSMUST00000158107 313 ntBASIC5.3□□□□□ -1.56
Sec61a1P61620 Gm23259-201ENSMUST00000158318 303 ntBASIC5.3□□□□□ -1.56
Sec61a1P61620 Gm25487-201ENSMUST00000158725 125 ntBASIC5.3□□□□□ -1.56
Sec61a1P61620 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC5.3□□□□□ -1.56
Sec61a1P61620 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC5.3□□□□□ -1.56
Sec61a1P61620 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Sec61a1P61620 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sec61a1P61620 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Sec61a1P61620 Gm27853-201ENSMUST00000184176 250 ntBASIC5.3□□□□□ -1.56
Sec61a1P61620 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC5.3□□□□□ -1.56
Sec61a1P61620 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC5.3□□□□□ -1.56
Sec61a1P61620 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC5.3□□□□□ -1.56
Sec61a1P61620 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC5.3□□□□□ -1.56
Sec61a1P61620 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC5.3□□□□□ -1.56
Sec61a1P61620 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC5.3□□□□□ -1.56
Sec61a1P61620 Gm37135-201ENSMUST00000192652 534 ntBASIC5.3□□□□□ -1.56
Sec61a1P61620 Gm43354-201ENSMUST00000196862 346 ntBASIC5.3□□□□□ -1.56
Sec61a1P61620 Gm7492-201ENSMUST00000201745 725 ntBASIC5.3□□□□□ -1.56
Sec61a1P61620 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC5.3□□□□□ -1.56
Sec61a1P61620 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC5.3□□□□□ -1.56
Sec61a1P61620 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC5.3□□□□□ -1.56
Sec61a1P61620 AC104906.1-201ENSMUST00000218122 913 ntBASIC5.3□□□□□ -1.56
Sec61a1P61620 AC147782.1-201ENSMUST00000219169 475 ntBASIC5.3□□□□□ -1.56
Sec61a1P61620 AC167222.2-201ENSMUST00000220014 295 ntBASIC5.3□□□□□ -1.56
Sec61a1P61620 AC122371.2-201ENSMUST00000220583 366 ntBASIC5.3□□□□□ -1.56
Sec61a1P61620 Gm3785-201ENSMUST00000221000 202 ntBASIC5.3□□□□□ -1.56
Sec61a1P61620 Gm9321-201ENSMUST00000221179 778 ntBASIC5.3□□□□□ -1.56
Sec61a1P61620 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Sec61a1P61620 AC131187.2-201ENSMUST00000223936 994 ntBASIC5.3□□□□□ -1.56
Sec61a1P61620 AC154642.1-201ENSMUST00000224173 740 ntBASIC5.3□□□□□ -1.56
Sec61a1P61620 AC133283.1-201ENSMUST00000228443 859 ntBASIC5.3□□□□□ -1.56
Sec61a1P61620 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sec61a1P61620 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Sec61a1P61620 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sec61a1P61620 Gm15732-201ENSMUST00000079794 480 ntBASIC5.3□□□□□ -1.56
Sec61a1P61620 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Sec61a1P61620 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Sec61a1P61620 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC5.3□□□□□ -1.56
Sec61a1P61620 Gm37833-201ENSMUST00000194342 3256 ntBASIC5.3□□□□□ -1.56
Sec61a1P61620 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Sec61a1P61620 Gm37725-201ENSMUST00000193965 2125 ntBASIC5.3□□□□□ -1.56
Sec61a1P61620 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sec61a1P61620 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
Sec61a1P61620 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sec61a1P61620 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC5.3□□□□□ -1.56
Sec61a1P61620 Gm37289-201ENSMUST00000195409 1402 ntBASIC5.3□□□□□ -1.56
Sec61a1P61620 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sec61a1P61620 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sec61a1P61620 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Sec61a1P61620 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Sec61a1P61620 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Sec61a1P61620 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Sec61a1P61620 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Sec61a1P61620 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Sec61a1P61620 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Sec61a1P61620 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
Sec61a1P61620 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Sec61a1P61620 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Sec61a1P61620 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Sec61a1P61620 Gm25415-201ENSMUST00000104220 132 ntBASIC5.29□□□□□ -1.56
Sec61a1P61620 Gm24989-201ENSMUST00000104461 88 ntBASIC5.29□□□□□ -1.56
Sec61a1P61620 Snora35-201ENSMUST00000104579 128 ntBASIC5.29□□□□□ -1.56
Sec61a1P61620 Gm12565-201ENSMUST00000119004 649 ntBASIC5.29□□□□□ -1.56
Sec61a1P61620 Gm15618-201ENSMUST00000121610 452 ntBASIC5.29□□□□□ -1.56
Sec61a1P61620 Gm12438-201ENSMUST00000122034 336 ntBASIC5.29□□□□□ -1.56
Sec61a1P61620 Rps29-ps-201ENSMUST00000122083 172 ntBASIC5.29□□□□□ -1.56
Sec61a1P61620 Gm23386-201ENSMUST00000158585 144 ntBASIC5.29□□□□□ -1.56
Sec61a1P61620 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC5.29□□□□□ -1.56
Sec61a1P61620 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC5.29□□□□□ -1.56
Sec61a1P61620 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Sec61a1P61620 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC5.29□□□□□ -1.56
Sec61a1P61620 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC5.29□□□□□ -1.56
Sec61a1P61620 Gm4831-201ENSMUST00000174626 594 ntBASIC5.29□□□□□ -1.56
Sec61a1P61620 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Sec61a1P61620 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
Sec61a1P61620 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Sec61a1P61620 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Sec61a1P61620 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC5.29□□□□□ -1.56
Sec61a1P61620 Gm4845-201ENSMUST00000179202 562 ntBASIC5.29□□□□□ -1.56
Sec61a1P61620 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Sec61a1P61620 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
Sec61a1P61620 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC5.29□□□□□ -1.56
Sec61a1P61620 Gm4322-201ENSMUST00000191094 336 ntBASIC5.29□□□□□ -1.56
Sec61a1P61620 Ighv1-10-201ENSMUST00000194372 355 ntBASIC5.29□□□□□ -1.56
Sec61a1P61620 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Sec61a1P61620 Gm42461-201ENSMUST00000198627 1150 ntBASIC5.29□□□□□ -1.56
Sec61a1P61620 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC5.29□□□□□ -1.56
Sec61a1P61620 Gm43233-201ENSMUST00000200491 616 ntBASIC5.29□□□□□ -1.56
Sec61a1P61620 Gm44162-201ENSMUST00000203543 544 ntBASIC5.29□□□□□ -1.56
Sec61a1P61620 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC5.29□□□□□ -1.56
Sec61a1P61620 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC5.29□□□□□ -1.56
Sec61a1P61620 Gm20074-201ENSMUST00000208144 484 ntBASIC5.29□□□□□ -1.56
Sec61a1P61620 Gm6009-201ENSMUST00000210848 280 ntBASIC5.29□□□□□ -1.56
Sec61a1P61620 Gm20946-201ENSMUST00000212367 461 ntBASIC5.29□□□□□ -1.56
Sec61a1P61620 Gm5055-201ENSMUST00000215697 581 ntBASIC5.29□□□□□ -1.56
Sec61a1P61620 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC5.29□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms