Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Gm27541-201ENSMUST00000184078 122 ntBASIC3.19□□□□□ -1.9
Herc1E9PZP8 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Gm9038-201ENSMUST00000203400 604 ntBASIC3.19□□□□□ -1.9
Herc1E9PZP8 Gm44234-201ENSMUST00000204246 900 ntBASIC3.19□□□□□ -1.9
Herc1E9PZP8 Gm45350-201ENSMUST00000210560 509 ntTSL 5 BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Gm45344-201ENSMUST00000211610 341 ntBASIC3.19□□□□□ -1.9
Herc1E9PZP8 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Gm10778-202ENSMUST00000189672 4735 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Gm45644-201ENSMUST00000210255 2740 ntBASIC3.19□□□□□ -1.9
Herc1E9PZP8 Ncoa3-201ENSMUST00000088095 7531 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Usf3-202ENSMUST00000119746 12708 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Gm12040-201ENSMUST00000118357 537 ntBASIC3.19□□□□□ -1.9
Herc1E9PZP8 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Gm26167-201ENSMUST00000158423 253 ntBASIC3.19□□□□□ -1.9
Herc1E9PZP8 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Gm8023-201ENSMUST00000195298 903 ntBASIC3.19□□□□□ -1.9
Herc1E9PZP8 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Ypel2-201ENSMUST00000018571 4847 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Ehbp1-201ENSMUST00000045167 4821 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Gm37880-201ENSMUST00000192216 3257 ntBASIC3.19□□□□□ -1.9
Herc1E9PZP8 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Ccdc141-207ENSMUST00000164114 6222 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Herc1E9PZP8 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Tssc1-206ENSMUST00000221877 4091 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Herc1E9PZP8 AC154354.1-201ENSMUST00000224585 2109 ntBASIC3.19□□□□□ -1.9
Herc1E9PZP8 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Gm22473-201ENSMUST00000104114 132 ntBASIC3.19□□□□□ -1.9
Herc1E9PZP8 Gm13745-201ENSMUST00000121994 527 ntBASIC3.19□□□□□ -1.9
Herc1E9PZP8 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC3.19□□□□□ -1.9
Herc1E9PZP8 Gm27564-201ENSMUST00000185196 96 ntBASIC3.19□□□□□ -1.9
Herc1E9PZP8 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Gm6988-201ENSMUST00000222676 375 ntBASIC3.19□□□□□ -1.9
Herc1E9PZP8 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC3.19□□□□□ -1.9
Herc1E9PZP8 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Qrich2-204ENSMUST00000208602 7260 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Daam1-205ENSMUST00000223272 5835 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Polr3f-201ENSMUST00000028914 4403 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Lhx4-201ENSMUST00000027740 5514 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Gm44022-201ENSMUST00000203708 5429 ntBASIC3.19□□□□□ -1.9
Herc1E9PZP8 Gm38661-201ENSMUST00000216555 5814 ntTSL 5 BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Gm12633-201ENSMUST00000117742 1705 ntBASIC3.19□□□□□ -1.9
Herc1E9PZP8 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC3.19□□□□□ -1.9
Herc1E9PZP8 Gm7840-201ENSMUST00000122086 533 ntBASIC3.19□□□□□ -1.9
Herc1E9PZP8 Gm12488-201ENSMUST00000122449 499 ntBASIC3.19□□□□□ -1.9
Herc1E9PZP8 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Scgb2b6-201ENSMUST00000188132 330 ntBASIC3.19□□□□□ -1.9
Herc1E9PZP8 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Herc1E9PZP8 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Herc1E9PZP8 Tacc2-202ENSMUST00000059145 3906 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Herc1E9PZP8 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Herc1E9PZP8 Adgrl3-208ENSMUST00000118442 5101 ntTSL 5 BASIC3.18□□□□□ -1.9
Herc1E9PZP8 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Herc1E9PZP8 Traf3-202ENSMUST00000060274 6896 ntTSL 5 BASIC3.18□□□□□ -1.9
Herc1E9PZP8 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
Herc1E9PZP8 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Herc1E9PZP8 Gm15263-201ENSMUST00000121556 642 ntBASIC3.18□□□□□ -1.9
Herc1E9PZP8 Gm25826-201ENSMUST00000157090 137 ntBASIC3.18□□□□□ -1.9
Herc1E9PZP8 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC3.18□□□□□ -1.9
Herc1E9PZP8 AC153961.1-201ENSMUST00000217760 385 ntBASIC3.18□□□□□ -1.9
Herc1E9PZP8 Olfr923-204ENSMUST00000219798 1068 ntBASIC3.18□□□□□ -1.9
Herc1E9PZP8 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Herc1E9PZP8 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Herc1E9PZP8 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Herc1E9PZP8 Gm26165-201ENSMUST00000083791 138 ntBASIC3.18□□□□□ -1.9
Herc1E9PZP8 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Herc1E9PZP8 Gm17638-201ENSMUST00000181255 4343 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Herc1E9PZP8 Eya3-213ENSMUST00000180250 5020 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Herc1E9PZP8 Gm42866-201ENSMUST00000195919 3304 ntBASIC3.18□□□□□ -1.9
Herc1E9PZP8 Gria3-201ENSMUST00000076349 5192 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
Herc1E9PZP8 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Herc1E9PZP8 Gm37648-201ENSMUST00000192072 2563 ntBASIC3.18□□□□□ -1.9
Herc1E9PZP8 Gm15930-201ENSMUST00000156603 2037 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms