Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Cx3cr1Q9Z0D9 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cx3cr1Q9Z0D9 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Cx3cr1Q9Z0D9 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cx3cr1Q9Z0D9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cx3cr1Q9Z0D9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cx3cr1Q9Z0D9 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cx3cr1Q9Z0D9 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Cx3cr1Q9Z0D9 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cx3cr1Q9Z0D9 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cx3cr1Q9Z0D9 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cx3cr1Q9Z0D9 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cx3cr1Q9Z0D9 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cx3cr1Q9Z0D9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cx3cr1Q9Z0D9 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cx3cr1Q9Z0D9 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cx3cr1Q9Z0D9 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cx3cr1Q9Z0D9 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cx3cr1Q9Z0D9 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Cx3cr1Q9Z0D9 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC15.21■□□□□ 0.03
Cx3cr1Q9Z0D9 Gm26971-201ENSMUST00000182423 1072 ntBASIC15.21■□□□□ 0.03
Cx3cr1Q9Z0D9 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cx3cr1Q9Z0D9 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cx3cr1Q9Z0D9 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cx3cr1Q9Z0D9 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Cx3cr1Q9Z0D9 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cx3cr1Q9Z0D9 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cx3cr1Q9Z0D9 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC15.21■□□□□ 0.03
Cx3cr1Q9Z0D9 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cx3cr1Q9Z0D9 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Cx3cr1Q9Z0D9 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cx3cr1Q9Z0D9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cx3cr1Q9Z0D9 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Cx3cr1Q9Z0D9 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cx3cr1Q9Z0D9 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cx3cr1Q9Z0D9 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cx3cr1Q9Z0D9 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Cx3cr1Q9Z0D9 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Cx3cr1Q9Z0D9 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cx3cr1Q9Z0D9 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cx3cr1Q9Z0D9 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.2■□□□□ 0.02
Cx3cr1Q9Z0D9 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cx3cr1Q9Z0D9 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cx3cr1Q9Z0D9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cx3cr1Q9Z0D9 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cx3cr1Q9Z0D9 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cx3cr1Q9Z0D9 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cx3cr1Q9Z0D9 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cx3cr1Q9Z0D9 Gm43173-201ENSMUST00000202246 593 ntBASIC15.2■□□□□ 0.02
Cx3cr1Q9Z0D9 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC15.2■□□□□ 0.02
Cx3cr1Q9Z0D9 AC140930.3-201ENSMUST00000222935 274 ntBASIC15.2■□□□□ 0.02
Cx3cr1Q9Z0D9 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cx3cr1Q9Z0D9 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cx3cr1Q9Z0D9 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cx3cr1Q9Z0D9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cx3cr1Q9Z0D9 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cx3cr1Q9Z0D9 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC15.2■□□□□ 0.02
Cx3cr1Q9Z0D9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cx3cr1Q9Z0D9 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cx3cr1Q9Z0D9 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Cx3cr1Q9Z0D9 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.19■□□□□ 0.02
Cx3cr1Q9Z0D9 Gm8493-201ENSMUST00000196881 489 ntBASIC15.19■□□□□ 0.02
Cx3cr1Q9Z0D9 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cx3cr1Q9Z0D9 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cx3cr1Q9Z0D9 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cx3cr1Q9Z0D9 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC15.19■□□□□ 0.02
Cx3cr1Q9Z0D9 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cx3cr1Q9Z0D9 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cx3cr1Q9Z0D9 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Cx3cr1Q9Z0D9 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cx3cr1Q9Z0D9 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Cx3cr1Q9Z0D9 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cx3cr1Q9Z0D9 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cx3cr1Q9Z0D9 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cx3cr1Q9Z0D9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.19■□□□□ 0.02
Cx3cr1Q9Z0D9 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cx3cr1Q9Z0D9 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cx3cr1Q9Z0D9 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cx3cr1Q9Z0D9 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cx3cr1Q9Z0D9 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cx3cr1Q9Z0D9 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cx3cr1Q9Z0D9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Cx3cr1Q9Z0D9 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cx3cr1Q9Z0D9 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cx3cr1Q9Z0D9 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cx3cr1Q9Z0D9 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.18■□□□□ 0.02
Cx3cr1Q9Z0D9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cx3cr1Q9Z0D9 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cx3cr1Q9Z0D9 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC15.18■□□□□ 0.02
Cx3cr1Q9Z0D9 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cx3cr1Q9Z0D9 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Cx3cr1Q9Z0D9 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cx3cr1Q9Z0D9 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cx3cr1Q9Z0D9 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Cx3cr1Q9Z0D9 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cx3cr1Q9Z0D9 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cx3cr1Q9Z0D9 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.18■□□□□ 0.02
Cx3cr1Q9Z0D9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cx3cr1Q9Z0D9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cx3cr1Q9Z0D9 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms