Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.32■□□□□ 0.52
POLR1DQ9Y2S0 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR1DQ9Y2S0 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
POLR1DQ9Y2S0 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
POLR1DQ9Y2S0 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR1DQ9Y2S0 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR1DQ9Y2S0 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR1DQ9Y2S0 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.31■□□□□ 0.52
POLR1DQ9Y2S0 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR1DQ9Y2S0 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR1DQ9Y2S0 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR1DQ9Y2S0 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.31■□□□□ 0.52
POLR1DQ9Y2S0 ZNRF2P3-201ENST00000424200 374 ntBASIC18.31■□□□□ 0.52
POLR1DQ9Y2S0 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
POLR1DQ9Y2S0 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.31■□□□□ 0.52
POLR1DQ9Y2S0 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.31■□□□□ 0.52
POLR1DQ9Y2S0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
POLR1DQ9Y2S0 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR1DQ9Y2S0 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
POLR1DQ9Y2S0 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR1DQ9Y2S0 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR1DQ9Y2S0 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
POLR1DQ9Y2S0 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.31■□□□□ 0.52
POLR1DQ9Y2S0 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
POLR1DQ9Y2S0 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR1DQ9Y2S0 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR1DQ9Y2S0 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
POLR1DQ9Y2S0 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
POLR1DQ9Y2S0 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
POLR1DQ9Y2S0 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.3■□□□□ 0.52
POLR1DQ9Y2S0 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.3■□□□□ 0.52
POLR1DQ9Y2S0 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.3■□□□□ 0.52
POLR1DQ9Y2S0 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.3■□□□□ 0.52
POLR1DQ9Y2S0 AC245052.3-201ENST00000450182 901 ntBASIC18.3■□□□□ 0.52
POLR1DQ9Y2S0 AC010141.2-201ENST00000452426 721 ntBASIC18.3■□□□□ 0.52
POLR1DQ9Y2S0 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.3■□□□□ 0.52
POLR1DQ9Y2S0 DUX4L2-201ENST00000561772 1275 ntBASIC18.3■□□□□ 0.52
POLR1DQ9Y2S0 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
POLR1DQ9Y2S0 AC104187.1-201ENST00000607510 612 ntBASIC18.3■□□□□ 0.52
POLR1DQ9Y2S0 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.3■□□□□ 0.52
POLR1DQ9Y2S0 DUX4L6-201ENST00000626483 1275 ntBASIC18.3■□□□□ 0.52
POLR1DQ9Y2S0 DUX4L1-201ENST00000627662 1275 ntBASIC18.3■□□□□ 0.52
POLR1DQ9Y2S0 DUX4L8-201ENST00000629013 1275 ntBASIC18.3■□□□□ 0.52
POLR1DQ9Y2S0 DUX4L3-201ENST00000630187 1275 ntBASIC18.3■□□□□ 0.52
POLR1DQ9Y2S0 DUX4L7-201ENST00000630678 1275 ntBASIC18.3■□□□□ 0.52
POLR1DQ9Y2S0 DUX4L5-201ENST00000630834 1275 ntBASIC18.3■□□□□ 0.52
POLR1DQ9Y2S0 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
POLR1DQ9Y2S0 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR1DQ9Y2S0 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
POLR1DQ9Y2S0 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.3■□□□□ 0.52
POLR1DQ9Y2S0 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR1DQ9Y2S0 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
POLR1DQ9Y2S0 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
POLR1DQ9Y2S0 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.3■□□□□ 0.52
POLR1DQ9Y2S0 PLK5-205ENST00000642079 1969 ntBASIC18.3■□□□□ 0.52
POLR1DQ9Y2S0 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
POLR1DQ9Y2S0 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
POLR1DQ9Y2S0 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
POLR1DQ9Y2S0 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
POLR1DQ9Y2S0 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
POLR1DQ9Y2S0 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
POLR1DQ9Y2S0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
POLR1DQ9Y2S0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
POLR1DQ9Y2S0 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
POLR1DQ9Y2S0 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
POLR1DQ9Y2S0 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
POLR1DQ9Y2S0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
POLR1DQ9Y2S0 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
POLR1DQ9Y2S0 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
POLR1DQ9Y2S0 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
POLR1DQ9Y2S0 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
POLR1DQ9Y2S0 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.29■□□□□ 0.52
POLR1DQ9Y2S0 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.29■□□□□ 0.52
POLR1DQ9Y2S0 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.29■□□□□ 0.52
POLR1DQ9Y2S0 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
POLR1DQ9Y2S0 KRT18P14-201ENST00000534205 1250 ntBASIC18.29■□□□□ 0.52
POLR1DQ9Y2S0 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.29■□□□□ 0.52
POLR1DQ9Y2S0 CCDC92B-201ENST00000575506 885 ntBASIC18.29■□□□□ 0.52
POLR1DQ9Y2S0 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.29■□□□□ 0.52
POLR1DQ9Y2S0 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
POLR1DQ9Y2S0 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
POLR1DQ9Y2S0 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
POLR1DQ9Y2S0 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
POLR1DQ9Y2S0 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
POLR1DQ9Y2S0 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
POLR1DQ9Y2S0 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
POLR1DQ9Y2S0 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
POLR1DQ9Y2S0 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
POLR1DQ9Y2S0 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
POLR1DQ9Y2S0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.28■□□□□ 0.52
POLR1DQ9Y2S0 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
POLR1DQ9Y2S0 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
POLR1DQ9Y2S0 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.28■□□□□ 0.52
POLR1DQ9Y2S0 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.28■□□□□ 0.52
POLR1DQ9Y2S0 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
POLR1DQ9Y2S0 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.28■□□□□ 0.52
POLR1DQ9Y2S0 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.28■□□□□ 0.52
POLR1DQ9Y2S0 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
POLR1DQ9Y2S0 KRT16P2-201ENST00000414673 1423 ntBASIC18.28■□□□□ 0.52
POLR1DQ9Y2S0 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms