Protein–RNA interactions for Protein: Q9WTN0

Ggps1, Geranylgeranyl pyrophosphate synthase, mousemouse

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ggps1Q9WTN0 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ggps1Q9WTN0 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ggps1Q9WTN0 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ggps1Q9WTN0 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.9■□□□□ 0.78
Ggps1Q9WTN0 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.9■□□□□ 0.78
Ggps1Q9WTN0 Gm10517-202ENSMUST00000192970 758 ntBASIC19.9■□□□□ 0.78
Ggps1Q9WTN0 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.9■□□□□ 0.78
Ggps1Q9WTN0 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ggps1Q9WTN0 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ggps1Q9WTN0 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ggps1Q9WTN0 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ggps1Q9WTN0 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ggps1Q9WTN0 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ggps1Q9WTN0 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ggps1Q9WTN0 Gm12085-201ENSMUST00000119263 940 ntBASIC19.89■□□□□ 0.77
Ggps1Q9WTN0 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ggps1Q9WTN0 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ggps1Q9WTN0 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.89■□□□□ 0.77
Ggps1Q9WTN0 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ggps1Q9WTN0 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ggps1Q9WTN0 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ggps1Q9WTN0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ggps1Q9WTN0 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ggps1Q9WTN0 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ggps1Q9WTN0 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ggps1Q9WTN0 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.88■□□□□ 0.77
Ggps1Q9WTN0 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.88■□□□□ 0.77
Ggps1Q9WTN0 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ggps1Q9WTN0 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Ggps1Q9WTN0 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ggps1Q9WTN0 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.88■□□□□ 0.77
Ggps1Q9WTN0 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC19.88■□□□□ 0.77
Ggps1Q9WTN0 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ggps1Q9WTN0 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.88■□□□□ 0.77
Ggps1Q9WTN0 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ggps1Q9WTN0 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Ggps1Q9WTN0 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.88■□□□□ 0.77
Ggps1Q9WTN0 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ggps1Q9WTN0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ggps1Q9WTN0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Ggps1Q9WTN0 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ggps1Q9WTN0 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ggps1Q9WTN0 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ggps1Q9WTN0 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ggps1Q9WTN0 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ggps1Q9WTN0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ggps1Q9WTN0 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ggps1Q9WTN0 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ggps1Q9WTN0 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ggps1Q9WTN0 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ggps1Q9WTN0 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Ggps1Q9WTN0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.87■□□□□ 0.77
Ggps1Q9WTN0 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ggps1Q9WTN0 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ggps1Q9WTN0 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ggps1Q9WTN0 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ggps1Q9WTN0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ggps1Q9WTN0 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ggps1Q9WTN0 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ggps1Q9WTN0 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ggps1Q9WTN0 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.86■□□□□ 0.77
Ggps1Q9WTN0 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Ggps1Q9WTN0 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ggps1Q9WTN0 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ggps1Q9WTN0 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ggps1Q9WTN0 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ggps1Q9WTN0 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ggps1Q9WTN0 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.85■□□□□ 0.77
Ggps1Q9WTN0 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ggps1Q9WTN0 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.85■□□□□ 0.77
Ggps1Q9WTN0 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.85■□□□□ 0.77
Ggps1Q9WTN0 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ggps1Q9WTN0 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ggps1Q9WTN0 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ggps1Q9WTN0 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ggps1Q9WTN0 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ggps1Q9WTN0 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ggps1Q9WTN0 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ggps1Q9WTN0 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.84■□□□□ 0.77
Ggps1Q9WTN0 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.84■□□□□ 0.77
Ggps1Q9WTN0 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ggps1Q9WTN0 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ggps1Q9WTN0 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ggps1Q9WTN0 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ggps1Q9WTN0 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Ggps1Q9WTN0 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.84■□□□□ 0.77
Ggps1Q9WTN0 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ggps1Q9WTN0 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ggps1Q9WTN0 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ggps1Q9WTN0 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.84■□□□□ 0.77
Ggps1Q9WTN0 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Ggps1Q9WTN0 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ggps1Q9WTN0 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ggps1Q9WTN0 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Ggps1Q9WTN0 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ggps1Q9WTN0 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Ggps1Q9WTN0 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.83■□□□□ 0.77
Ggps1Q9WTN0 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ggps1Q9WTN0 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ggps1Q9WTN0 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms