Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sec61a2Q9JLR1 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sec61a2Q9JLR1 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sec61a2Q9JLR1 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sec61a2Q9JLR1 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sec61a2Q9JLR1 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sec61a2Q9JLR1 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.14■□□□□ 0.17
Sec61a2Q9JLR1 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sec61a2Q9JLR1 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sec61a2Q9JLR1 Gm10602-201ENSMUST00000098239 609 ntBASIC16.14■□□□□ 0.17
Sec61a2Q9JLR1 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Sec61a2Q9JLR1 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sec61a2Q9JLR1 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.14■□□□□ 0.17
Sec61a2Q9JLR1 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sec61a2Q9JLR1 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sec61a2Q9JLR1 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sec61a2Q9JLR1 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sec61a2Q9JLR1 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.13■□□□□ 0.17
Sec61a2Q9JLR1 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sec61a2Q9JLR1 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sec61a2Q9JLR1 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sec61a2Q9JLR1 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Sec61a2Q9JLR1 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sec61a2Q9JLR1 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sec61a2Q9JLR1 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sec61a2Q9JLR1 Gm13148-201ENSMUST00000118892 745 ntBASIC16.13■□□□□ 0.17
Sec61a2Q9JLR1 Gm12933-201ENSMUST00000120203 872 ntBASIC16.13■□□□□ 0.17
Sec61a2Q9JLR1 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Sec61a2Q9JLR1 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sec61a2Q9JLR1 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.13■□□□□ 0.17
Sec61a2Q9JLR1 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sec61a2Q9JLR1 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sec61a2Q9JLR1 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sec61a2Q9JLR1 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sec61a2Q9JLR1 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Sec61a2Q9JLR1 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sec61a2Q9JLR1 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sec61a2Q9JLR1 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sec61a2Q9JLR1 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Sec61a2Q9JLR1 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.12■□□□□ 0.17
Sec61a2Q9JLR1 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Sec61a2Q9JLR1 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.12■□□□□ 0.17
Sec61a2Q9JLR1 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.12■□□□□ 0.17
Sec61a2Q9JLR1 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Sec61a2Q9JLR1 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.12■□□□□ 0.17
Sec61a2Q9JLR1 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Sec61a2Q9JLR1 Mir5133-201ENSMUST00000174955 77 ntBASIC16.12■□□□□ 0.17
Sec61a2Q9JLR1 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Sec61a2Q9JLR1 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sec61a2Q9JLR1 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sec61a2Q9JLR1 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sec61a2Q9JLR1 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sec61a2Q9JLR1 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.12■□□□□ 0.17
Sec61a2Q9JLR1 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sec61a2Q9JLR1 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sec61a2Q9JLR1 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sec61a2Q9JLR1 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.11■□□□□ 0.17
Sec61a2Q9JLR1 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sec61a2Q9JLR1 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.11■□□□□ 0.17
Sec61a2Q9JLR1 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sec61a2Q9JLR1 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sec61a2Q9JLR1 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sec61a2Q9JLR1 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Sec61a2Q9JLR1 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.11■□□□□ 0.17
Sec61a2Q9JLR1 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Sec61a2Q9JLR1 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Sec61a2Q9JLR1 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Sec61a2Q9JLR1 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.11■□□□□ 0.17
Sec61a2Q9JLR1 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
Sec61a2Q9JLR1 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Sec61a2Q9JLR1 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.11■□□□□ 0.17
Sec61a2Q9JLR1 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sec61a2Q9JLR1 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sec61a2Q9JLR1 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sec61a2Q9JLR1 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Sec61a2Q9JLR1 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.11■□□□□ 0.17
Sec61a2Q9JLR1 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sec61a2Q9JLR1 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sec61a2Q9JLR1 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sec61a2Q9JLR1 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.1■□□□□ 0.17
Sec61a2Q9JLR1 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sec61a2Q9JLR1 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sec61a2Q9JLR1 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.1■□□□□ 0.17
Sec61a2Q9JLR1 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.1■□□□□ 0.17
Sec61a2Q9JLR1 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sec61a2Q9JLR1 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sec61a2Q9JLR1 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sec61a2Q9JLR1 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sec61a2Q9JLR1 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.09■□□□□ 0.17
Sec61a2Q9JLR1 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sec61a2Q9JLR1 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Sec61a2Q9JLR1 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sec61a2Q9JLR1 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Sec61a2Q9JLR1 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Sec61a2Q9JLR1 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.09■□□□□ 0.17
Sec61a2Q9JLR1 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sec61a2Q9JLR1 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sec61a2Q9JLR1 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sec61a2Q9JLR1 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sec61a2Q9JLR1 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms