Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ClpxQ9JHS4 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ClpxQ9JHS4 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ClpxQ9JHS4 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
ClpxQ9JHS4 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ClpxQ9JHS4 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ClpxQ9JHS4 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.21
ClpxQ9JHS4 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.39■□□□□ 0.21
ClpxQ9JHS4 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
ClpxQ9JHS4 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ClpxQ9JHS4 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ClpxQ9JHS4 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.39■□□□□ 0.21
ClpxQ9JHS4 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
ClpxQ9JHS4 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ClpxQ9JHS4 Gm8969-201ENSMUST00000199694 526 ntBASIC16.39■□□□□ 0.21
ClpxQ9JHS4 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.39■□□□□ 0.21
ClpxQ9JHS4 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
ClpxQ9JHS4 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ClpxQ9JHS4 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ClpxQ9JHS4 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ClpxQ9JHS4 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ClpxQ9JHS4 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ClpxQ9JHS4 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ClpxQ9JHS4 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ClpxQ9JHS4 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ClpxQ9JHS4 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.38■□□□□ 0.21
ClpxQ9JHS4 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
ClpxQ9JHS4 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ClpxQ9JHS4 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ClpxQ9JHS4 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
ClpxQ9JHS4 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ClpxQ9JHS4 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ClpxQ9JHS4 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.38■□□□□ 0.21
ClpxQ9JHS4 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ClpxQ9JHS4 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ClpxQ9JHS4 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ClpxQ9JHS4 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ClpxQ9JHS4 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.38■□□□□ 0.21
ClpxQ9JHS4 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ClpxQ9JHS4 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ClpxQ9JHS4 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.38■□□□□ 0.21
ClpxQ9JHS4 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
ClpxQ9JHS4 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ClpxQ9JHS4 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ClpxQ9JHS4 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
ClpxQ9JHS4 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ClpxQ9JHS4 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
ClpxQ9JHS4 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ClpxQ9JHS4 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ClpxQ9JHS4 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
ClpxQ9JHS4 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ClpxQ9JHS4 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ClpxQ9JHS4 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.37■□□□□ 0.21
ClpxQ9JHS4 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ClpxQ9JHS4 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ClpxQ9JHS4 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ClpxQ9JHS4 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
ClpxQ9JHS4 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ClpxQ9JHS4 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ClpxQ9JHS4 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ClpxQ9JHS4 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
ClpxQ9JHS4 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.37■□□□□ 0.21
ClpxQ9JHS4 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ClpxQ9JHS4 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.36■□□□□ 0.21
ClpxQ9JHS4 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ClpxQ9JHS4 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ClpxQ9JHS4 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ClpxQ9JHS4 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
ClpxQ9JHS4 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ClpxQ9JHS4 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.36■□□□□ 0.21
ClpxQ9JHS4 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.36■□□□□ 0.21
ClpxQ9JHS4 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.36■□□□□ 0.21
ClpxQ9JHS4 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ClpxQ9JHS4 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ClpxQ9JHS4 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ClpxQ9JHS4 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ClpxQ9JHS4 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ClpxQ9JHS4 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.36■□□□□ 0.21
ClpxQ9JHS4 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ClpxQ9JHS4 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ClpxQ9JHS4 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
ClpxQ9JHS4 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ClpxQ9JHS4 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ClpxQ9JHS4 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ClpxQ9JHS4 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ClpxQ9JHS4 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ClpxQ9JHS4 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ClpxQ9JHS4 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ClpxQ9JHS4 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ClpxQ9JHS4 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
ClpxQ9JHS4 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ClpxQ9JHS4 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ClpxQ9JHS4 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ClpxQ9JHS4 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ClpxQ9JHS4 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ClpxQ9JHS4 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ClpxQ9JHS4 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ClpxQ9JHS4 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
ClpxQ9JHS4 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.35■□□□□ 0.21
ClpxQ9JHS4 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms