Protein–RNA interactions for Protein: Q9DCF9

Ssr3, Translocon-associated protein subunit gamma, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3Q9DCF9 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ssr3Q9DCF9 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Ssr3Q9DCF9 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ssr3Q9DCF9 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.07■□□□□ 0.16
Ssr3Q9DCF9 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Ssr3Q9DCF9 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ssr3Q9DCF9 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ssr3Q9DCF9 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ssr3Q9DCF9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ssr3Q9DCF9 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ssr3Q9DCF9 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ssr3Q9DCF9 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ssr3Q9DCF9 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ssr3Q9DCF9 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ssr3Q9DCF9 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.07■□□□□ 0.16
Ssr3Q9DCF9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ssr3Q9DCF9 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ssr3Q9DCF9 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ssr3Q9DCF9 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ssr3Q9DCF9 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ssr3Q9DCF9 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Ssr3Q9DCF9 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ssr3Q9DCF9 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.06■□□□□ 0.16
Ssr3Q9DCF9 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.06■□□□□ 0.16
Ssr3Q9DCF9 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ssr3Q9DCF9 Gm42501-201ENSMUST00000200220 1026 ntBASIC16.06■□□□□ 0.16
Ssr3Q9DCF9 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC16.06■□□□□ 0.16
Ssr3Q9DCF9 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ssr3Q9DCF9 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Ssr3Q9DCF9 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Ssr3Q9DCF9 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ssr3Q9DCF9 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ssr3Q9DCF9 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ssr3Q9DCF9 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ssr3Q9DCF9 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ssr3Q9DCF9 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ssr3Q9DCF9 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ssr3Q9DCF9 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ssr3Q9DCF9 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ssr3Q9DCF9 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ssr3Q9DCF9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.05■□□□□ 0.16
Ssr3Q9DCF9 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ssr3Q9DCF9 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Ssr3Q9DCF9 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
Ssr3Q9DCF9 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.05■□□□□ 0.16
Ssr3Q9DCF9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ssr3Q9DCF9 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ssr3Q9DCF9 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr3Q9DCF9 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC16.04■□□□□ 0.16
Ssr3Q9DCF9 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr3Q9DCF9 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr3Q9DCF9 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr3Q9DCF9 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr3Q9DCF9 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr3Q9DCF9 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr3Q9DCF9 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.04■□□□□ 0.16
Ssr3Q9DCF9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.04■□□□□ 0.16
Ssr3Q9DCF9 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr3Q9DCF9 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC16.04■□□□□ 0.16
Ssr3Q9DCF9 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr3Q9DCF9 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC16.04■□□□□ 0.16
Ssr3Q9DCF9 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr3Q9DCF9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr3Q9DCF9 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr3Q9DCF9 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Ssr3Q9DCF9 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr3Q9DCF9 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr3Q9DCF9 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ssr3Q9DCF9 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ssr3Q9DCF9 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ssr3Q9DCF9 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ssr3Q9DCF9 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
Ssr3Q9DCF9 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ssr3Q9DCF9 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ssr3Q9DCF9 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ssr3Q9DCF9 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.03■□□□□ 0.16
Ssr3Q9DCF9 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ssr3Q9DCF9 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ssr3Q9DCF9 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ssr3Q9DCF9 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ssr3Q9DCF9 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ssr3Q9DCF9 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ssr3Q9DCF9 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ssr3Q9DCF9 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ssr3Q9DCF9 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC16.02■□□□□ 0.16
Ssr3Q9DCF9 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ssr3Q9DCF9 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Ssr3Q9DCF9 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ssr3Q9DCF9 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ssr3Q9DCF9 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ssr3Q9DCF9 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.02■□□□□ 0.15
Ssr3Q9DCF9 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ssr3Q9DCF9 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ssr3Q9DCF9 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.02■□□□□ 0.15
Ssr3Q9DCF9 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Ssr3Q9DCF9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ssr3Q9DCF9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ssr3Q9DCF9 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ssr3Q9DCF9 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Ssr3Q9DCF9 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms