Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Ccdc7Q9D541 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc7Q9D541 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc7Q9D541 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc7Q9D541 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc7Q9D541 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.99■□□□□ 0.95
Ccdc7Q9D541 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc7Q9D541 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20.99■□□□□ 0.95
Ccdc7Q9D541 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc7Q9D541 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Ccdc7Q9D541 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc7Q9D541 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc7Q9D541 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Ccdc7Q9D541 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.99■□□□□ 0.95
Ccdc7Q9D541 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc7Q9D541 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc7Q9D541 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc7Q9D541 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc7Q9D541 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc7Q9D541 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc7Q9D541 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc7Q9D541 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc7Q9D541 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc7Q9D541 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc7Q9D541 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc7Q9D541 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.98■□□□□ 0.95
Ccdc7Q9D541 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC20.98■□□□□ 0.95
Ccdc7Q9D541 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.98■□□□□ 0.95
Ccdc7Q9D541 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc7Q9D541 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc7Q9D541 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Ccdc7Q9D541 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc7Q9D541 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Ccdc7Q9D541 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc7Q9D541 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc7Q9D541 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc7Q9D541 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc7Q9D541 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.97■□□□□ 0.95
Ccdc7Q9D541 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc7Q9D541 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc7Q9D541 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.97■□□□□ 0.95
Ccdc7Q9D541 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc7Q9D541 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.97■□□□□ 0.95
Ccdc7Q9D541 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Ccdc7Q9D541 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc7Q9D541 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc7Q9D541 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc7Q9D541 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc7Q9D541 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc7Q9D541 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc7Q9D541 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc7Q9D541 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc7Q9D541 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Ccdc7Q9D541 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc7Q9D541 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc7Q9D541 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc7Q9D541 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.96■□□□□ 0.95
Ccdc7Q9D541 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
Ccdc7Q9D541 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc7Q9D541 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc7Q9D541 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc7Q9D541 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc7Q9D541 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc7Q9D541 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc7Q9D541 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc7Q9D541 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc7Q9D541 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Ccdc7Q9D541 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.95■□□□□ 0.94
Ccdc7Q9D541 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc7Q9D541 Gm26524-201ENSMUST00000192339 390 ntBASIC20.95■□□□□ 0.94
Ccdc7Q9D541 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.95■□□□□ 0.94
Ccdc7Q9D541 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc7Q9D541 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc7Q9D541 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc7Q9D541 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc7Q9D541 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc7Q9D541 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc7Q9D541 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc7Q9D541 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc7Q9D541 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc7Q9D541 Gm2399-201ENSMUST00000104944 225 ntBASIC20.94■□□□□ 0.94
Ccdc7Q9D541 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc7Q9D541 Gm13148-201ENSMUST00000118892 745 ntBASIC20.94■□□□□ 0.94
Ccdc7Q9D541 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.94■□□□□ 0.94
Ccdc7Q9D541 Zfp783-201ENSMUST00000095946 670 ntBASIC20.94■□□□□ 0.94
Ccdc7Q9D541 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc7Q9D541 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc7Q9D541 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc7Q9D541 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc7Q9D541 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc7Q9D541 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.94■□□□□ 0.94
Ccdc7Q9D541 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc7Q9D541 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc7Q9D541 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc7Q9D541 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc7Q9D541 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc7Q9D541 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc7Q9D541 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc7Q9D541 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc7Q9D541 Gm44549-201ENSMUST00000208351 577 ntBASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms