Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC19.3■□□□□ 0.68
Lysmd1Q9D0E3 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC19.3■□□□□ 0.68
Lysmd1Q9D0E3 AC158982.1-201ENSMUST00000228377 901 ntBASIC19.3■□□□□ 0.68
Lysmd1Q9D0E3 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lysmd1Q9D0E3 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lysmd1Q9D0E3 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lysmd1Q9D0E3 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lysmd1Q9D0E3 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lysmd1Q9D0E3 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.3■□□□□ 0.68
Lysmd1Q9D0E3 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lysmd1Q9D0E3 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lysmd1Q9D0E3 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.29■□□□□ 0.68
Lysmd1Q9D0E3 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lysmd1Q9D0E3 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Lysmd1Q9D0E3 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lysmd1Q9D0E3 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC19.29■□□□□ 0.68
Lysmd1Q9D0E3 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Lysmd1Q9D0E3 Gm14822-201ENSMUST00000122247 291 ntBASIC19.29■□□□□ 0.68
Lysmd1Q9D0E3 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC19.29■□□□□ 0.68
Lysmd1Q9D0E3 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.29■□□□□ 0.68
Lysmd1Q9D0E3 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lysmd1Q9D0E3 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lysmd1Q9D0E3 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Lysmd1Q9D0E3 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lysmd1Q9D0E3 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lysmd1Q9D0E3 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Lysmd1Q9D0E3 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lysmd1Q9D0E3 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Lysmd1Q9D0E3 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lysmd1Q9D0E3 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lysmd1Q9D0E3 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lysmd1Q9D0E3 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lysmd1Q9D0E3 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lysmd1Q9D0E3 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC19.28■□□□□ 0.68
Lysmd1Q9D0E3 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lysmd1Q9D0E3 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC19.28■□□□□ 0.68
Lysmd1Q9D0E3 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Lysmd1Q9D0E3 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lysmd1Q9D0E3 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lysmd1Q9D0E3 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Lysmd1Q9D0E3 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lysmd1Q9D0E3 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lysmd1Q9D0E3 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lysmd1Q9D0E3 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lysmd1Q9D0E3 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lysmd1Q9D0E3 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lysmd1Q9D0E3 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.28■□□□□ 0.68
Lysmd1Q9D0E3 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lysmd1Q9D0E3 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Lysmd1Q9D0E3 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.27■□□□□ 0.68
Lysmd1Q9D0E3 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lysmd1Q9D0E3 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Lysmd1Q9D0E3 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
Lysmd1Q9D0E3 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC19.27■□□□□ 0.68
Lysmd1Q9D0E3 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC19.27■□□□□ 0.68
Lysmd1Q9D0E3 Gm12350-201ENSMUST00000121208 462 ntBASIC19.27■□□□□ 0.68
Lysmd1Q9D0E3 Gm7862-201ENSMUST00000121461 292 ntBASIC19.27■□□□□ 0.68
Lysmd1Q9D0E3 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC19.27■□□□□ 0.68
Lysmd1Q9D0E3 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lysmd1Q9D0E3 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lysmd1Q9D0E3 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lysmd1Q9D0E3 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC19.27■□□□□ 0.68
Lysmd1Q9D0E3 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Lysmd1Q9D0E3 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Lysmd1Q9D0E3 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lysmd1Q9D0E3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lysmd1Q9D0E3 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lysmd1Q9D0E3 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Lysmd1Q9D0E3 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lysmd1Q9D0E3 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.26■□□□□ 0.67
Lysmd1Q9D0E3 Gm6376-201ENSMUST00000209407 580 ntBASIC19.26■□□□□ 0.67
Lysmd1Q9D0E3 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lysmd1Q9D0E3 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lysmd1Q9D0E3 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lysmd1Q9D0E3 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lysmd1Q9D0E3 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lysmd1Q9D0E3 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lysmd1Q9D0E3 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Lysmd1Q9D0E3 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lysmd1Q9D0E3 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lysmd1Q9D0E3 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lysmd1Q9D0E3 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lysmd1Q9D0E3 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lysmd1Q9D0E3 Gm7935-201ENSMUST00000100555 1278 ntBASIC19.25■□□□□ 0.67
Lysmd1Q9D0E3 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lysmd1Q9D0E3 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC19.25■□□□□ 0.67
Lysmd1Q9D0E3 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC19.25■□□□□ 0.67
Lysmd1Q9D0E3 AC225888.1-201ENSMUST00000227184 728 ntBASIC19.25■□□□□ 0.67
Lysmd1Q9D0E3 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lysmd1Q9D0E3 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lysmd1Q9D0E3 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.25■□□□□ 0.67
Lysmd1Q9D0E3 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lysmd1Q9D0E3 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lysmd1Q9D0E3 Gm15920-201ENSMUST00000118998 402 ntBASIC19.24■□□□□ 0.67
Lysmd1Q9D0E3 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC19.24■□□□□ 0.67
Lysmd1Q9D0E3 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC19.24■□□□□ 0.67
Lysmd1Q9D0E3 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lysmd1Q9D0E3 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lysmd1Q9D0E3 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lysmd1Q9D0E3 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms