Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.44■□□□□ 0.7
Ssr1Q9CY50 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ssr1Q9CY50 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.44■□□□□ 0.7
Ssr1Q9CY50 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ssr1Q9CY50 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ssr1Q9CY50 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ssr1Q9CY50 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ssr1Q9CY50 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ssr1Q9CY50 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ssr1Q9CY50 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ssr1Q9CY50 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.43■□□□□ 0.7
Ssr1Q9CY50 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ssr1Q9CY50 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ssr1Q9CY50 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Ssr1Q9CY50 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ssr1Q9CY50 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ssr1Q9CY50 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ssr1Q9CY50 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ssr1Q9CY50 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ssr1Q9CY50 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ssr1Q9CY50 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Ssr1Q9CY50 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ssr1Q9CY50 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ssr1Q9CY50 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ssr1Q9CY50 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ssr1Q9CY50 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ssr1Q9CY50 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ssr1Q9CY50 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ssr1Q9CY50 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ssr1Q9CY50 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ssr1Q9CY50 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Ssr1Q9CY50 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ssr1Q9CY50 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.42■□□□□ 0.7
Ssr1Q9CY50 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ssr1Q9CY50 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ssr1Q9CY50 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ssr1Q9CY50 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Ssr1Q9CY50 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ssr1Q9CY50 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ssr1Q9CY50 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.41■□□□□ 0.7
Ssr1Q9CY50 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ssr1Q9CY50 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ssr1Q9CY50 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ssr1Q9CY50 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ssr1Q9CY50 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ssr1Q9CY50 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ssr1Q9CY50 Gm13534-201ENSMUST00000121169 513 ntBASIC19.41■□□□□ 0.7
Ssr1Q9CY50 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ssr1Q9CY50 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.41■□□□□ 0.7
Ssr1Q9CY50 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.41■□□□□ 0.7
Ssr1Q9CY50 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ssr1Q9CY50 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ssr1Q9CY50 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ssr1Q9CY50 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ssr1Q9CY50 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Ssr1Q9CY50 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ssr1Q9CY50 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ssr1Q9CY50 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ssr1Q9CY50 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ssr1Q9CY50 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ssr1Q9CY50 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.4■□□□□ 0.7
Ssr1Q9CY50 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.4■□□□□ 0.7
Ssr1Q9CY50 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.4■□□□□ 0.7
Ssr1Q9CY50 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ssr1Q9CY50 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.4■□□□□ 0.7
Ssr1Q9CY50 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Ssr1Q9CY50 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ssr1Q9CY50 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ssr1Q9CY50 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ssr1Q9CY50 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ssr1Q9CY50 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ssr1Q9CY50 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ssr1Q9CY50 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Ssr1Q9CY50 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ssr1Q9CY50 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.39■□□□□ 0.69
Ssr1Q9CY50 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ssr1Q9CY50 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.39■□□□□ 0.69
Ssr1Q9CY50 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ssr1Q9CY50 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ssr1Q9CY50 Gm10493-201ENSMUST00000097270 612 ntBASIC19.39■□□□□ 0.69
Ssr1Q9CY50 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ssr1Q9CY50 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Ssr1Q9CY50 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ssr1Q9CY50 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ssr1Q9CY50 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ssr1Q9CY50 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ssr1Q9CY50 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ssr1Q9CY50 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ssr1Q9CY50 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ssr1Q9CY50 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ssr1Q9CY50 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ssr1Q9CY50 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ssr1Q9CY50 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ssr1Q9CY50 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Ssr1Q9CY50 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ssr1Q9CY50 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ssr1Q9CY50 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Ssr1Q9CY50 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ssr1Q9CY50 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ssr1Q9CY50 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms