Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Smc3Q9CW03 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Smc3Q9CW03 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Smc3Q9CW03 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Smc3Q9CW03 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC21.07■□□□□ 0.96
Smc3Q9CW03 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smc3Q9CW03 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smc3Q9CW03 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smc3Q9CW03 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Smc3Q9CW03 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Smc3Q9CW03 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smc3Q9CW03 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC21.07■□□□□ 0.96
Smc3Q9CW03 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Smc3Q9CW03 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smc3Q9CW03 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Smc3Q9CW03 Gm10033-202ENSMUST00000211874 928 ntBASIC21.07■□□□□ 0.96
Smc3Q9CW03 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smc3Q9CW03 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
Smc3Q9CW03 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smc3Q9CW03 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smc3Q9CW03 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smc3Q9CW03 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
Smc3Q9CW03 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Smc3Q9CW03 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Smc3Q9CW03 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smc3Q9CW03 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smc3Q9CW03 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smc3Q9CW03 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smc3Q9CW03 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smc3Q9CW03 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smc3Q9CW03 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC21.06■□□□□ 0.96
Smc3Q9CW03 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
Smc3Q9CW03 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smc3Q9CW03 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smc3Q9CW03 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Smc3Q9CW03 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC21.05■□□□□ 0.96
Smc3Q9CW03 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smc3Q9CW03 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Smc3Q9CW03 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Smc3Q9CW03 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC21.05■□□□□ 0.96
Smc3Q9CW03 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smc3Q9CW03 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smc3Q9CW03 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC21.05■□□□□ 0.96
Smc3Q9CW03 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smc3Q9CW03 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smc3Q9CW03 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Smc3Q9CW03 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smc3Q9CW03 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smc3Q9CW03 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smc3Q9CW03 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC21.05■□□□□ 0.96
Smc3Q9CW03 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smc3Q9CW03 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smc3Q9CW03 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Smc3Q9CW03 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Smc3Q9CW03 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smc3Q9CW03 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smc3Q9CW03 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smc3Q9CW03 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smc3Q9CW03 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Smc3Q9CW03 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Smc3Q9CW03 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
Smc3Q9CW03 Gm18671-201ENSMUST00000214826 683 ntBASIC21.04■□□□□ 0.96
Smc3Q9CW03 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Smc3Q9CW03 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smc3Q9CW03 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Smc3Q9CW03 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smc3Q9CW03 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smc3Q9CW03 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC21.04■□□□□ 0.96
Smc3Q9CW03 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smc3Q9CW03 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Smc3Q9CW03 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smc3Q9CW03 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smc3Q9CW03 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Smc3Q9CW03 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smc3Q9CW03 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smc3Q9CW03 Gm37194-201ENSMUST00000193092 3031 ntBASIC21.03■□□□□ 0.96
Smc3Q9CW03 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smc3Q9CW03 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smc3Q9CW03 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smc3Q9CW03 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smc3Q9CW03 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Smc3Q9CW03 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC21.03■□□□□ 0.96
Smc3Q9CW03 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Smc3Q9CW03 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smc3Q9CW03 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.03■□□□□ 0.96
Smc3Q9CW03 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Smc3Q9CW03 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smc3Q9CW03 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smc3Q9CW03 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Smc3Q9CW03 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smc3Q9CW03 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smc3Q9CW03 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Smc3Q9CW03 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smc3Q9CW03 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smc3Q9CW03 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Smc3Q9CW03 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
Smc3Q9CW03 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC21.02■□□□□ 0.96
Smc3Q9CW03 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smc3Q9CW03 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC21.02■□□□□ 0.96
Smc3Q9CW03 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms