Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
Smc1aQ9CU62 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc1aQ9CU62 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc1aQ9CU62 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Smc1aQ9CU62 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc1aQ9CU62 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc1aQ9CU62 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc1aQ9CU62 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Smc1aQ9CU62 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smc1aQ9CU62 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smc1aQ9CU62 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Smc1aQ9CU62 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Smc1aQ9CU62 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Smc1aQ9CU62 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smc1aQ9CU62 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Smc1aQ9CU62 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smc1aQ9CU62 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Smc1aQ9CU62 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.02■□□□□ 0.8
Smc1aQ9CU62 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smc1aQ9CU62 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smc1aQ9CU62 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smc1aQ9CU62 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smc1aQ9CU62 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smc1aQ9CU62 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Smc1aQ9CU62 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Smc1aQ9CU62 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Smc1aQ9CU62 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.02■□□□□ 0.8
Smc1aQ9CU62 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smc1aQ9CU62 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.02■□□□□ 0.8
Smc1aQ9CU62 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Smc1aQ9CU62 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Smc1aQ9CU62 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.79
Smc1aQ9CU62 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Smc1aQ9CU62 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Smc1aQ9CU62 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Smc1aQ9CU62 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Smc1aQ9CU62 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Smc1aQ9CU62 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc1aQ9CU62 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Smc1aQ9CU62 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc1aQ9CU62 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.01■□□□□ 0.79
Smc1aQ9CU62 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc1aQ9CU62 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Smc1aQ9CU62 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Smc1aQ9CU62 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Smc1aQ9CU62 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Smc1aQ9CU62 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc1aQ9CU62 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc1aQ9CU62 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc1aQ9CU62 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc1aQ9CU62 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Smc1aQ9CU62 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Smc1aQ9CU62 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smc1aQ9CU62 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smc1aQ9CU62 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smc1aQ9CU62 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Smc1aQ9CU62 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20■□□□□ 0.79
Smc1aQ9CU62 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smc1aQ9CU62 Gm37563-201ENSMUST00000192580 1513 ntBASIC20■□□□□ 0.79
Smc1aQ9CU62 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
Smc1aQ9CU62 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20■□□□□ 0.79
Smc1aQ9CU62 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smc1aQ9CU62 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Smc1aQ9CU62 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc1aQ9CU62 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Smc1aQ9CU62 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc1aQ9CU62 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc1aQ9CU62 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Smc1aQ9CU62 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc1aQ9CU62 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Smc1aQ9CU62 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Smc1aQ9CU62 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc1aQ9CU62 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc1aQ9CU62 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.99■□□□□ 0.79
Smc1aQ9CU62 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc1aQ9CU62 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc1aQ9CU62 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc1aQ9CU62 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Smc1aQ9CU62 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.98■□□□□ 0.79
Smc1aQ9CU62 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc1aQ9CU62 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc1aQ9CU62 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Smc1aQ9CU62 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.98■□□□□ 0.79
Smc1aQ9CU62 Mir7071-201ENSMUST00000184847 69 ntBASIC19.98■□□□□ 0.79
Smc1aQ9CU62 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc1aQ9CU62 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Smc1aQ9CU62 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc1aQ9CU62 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc1aQ9CU62 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.98■□□□□ 0.79
Smc1aQ9CU62 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc1aQ9CU62 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc1aQ9CU62 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smc1aQ9CU62 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smc1aQ9CU62 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smc1aQ9CU62 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smc1aQ9CU62 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smc1aQ9CU62 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc1aQ9CU62 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc1aQ9CU62 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc1aQ9CU62 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms