Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sec61bQ9CQS8 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Sec61bQ9CQS8 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Sec61bQ9CQS8 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sec61bQ9CQS8 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sec61bQ9CQS8 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC9.63□□□□□ -0.87
Sec61bQ9CQS8 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Sec61bQ9CQS8 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC9.63□□□□□ -0.87
Sec61bQ9CQS8 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Sec61bQ9CQS8 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sec61bQ9CQS8 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61bQ9CQS8 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61bQ9CQS8 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Sec61bQ9CQS8 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61bQ9CQS8 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61bQ9CQS8 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61bQ9CQS8 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61bQ9CQS8 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61bQ9CQS8 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Sec61bQ9CQS8 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61bQ9CQS8 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC9.62□□□□□ -0.87
Sec61bQ9CQS8 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Sec61bQ9CQS8 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61bQ9CQS8 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61bQ9CQS8 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC9.62□□□□□ -0.87
Sec61bQ9CQS8 Gm29994-201ENSMUST00000195495 1193 ntBASIC9.62□□□□□ -0.87
Sec61bQ9CQS8 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC9.62□□□□□ -0.87
Sec61bQ9CQS8 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61bQ9CQS8 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61bQ9CQS8 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Sec61bQ9CQS8 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC9.62□□□□□ -0.87
Sec61bQ9CQS8 AC153881.2-201ENSMUST00000214877 204 ntBASIC9.62□□□□□ -0.87
Sec61bQ9CQS8 AC124603.1-201ENSMUST00000223843 308 ntBASIC9.62□□□□□ -0.87
Sec61bQ9CQS8 AC156016.1-201ENSMUST00000227190 1035 ntBASIC9.62□□□□□ -0.87
Sec61bQ9CQS8 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61bQ9CQS8 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61bQ9CQS8 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Sec61bQ9CQS8 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC9.62□□□□□ -0.87
Sec61bQ9CQS8 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61bQ9CQS8 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61bQ9CQS8 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
Sec61bQ9CQS8 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61bQ9CQS8 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61bQ9CQS8 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Sec61bQ9CQS8 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sec61bQ9CQS8 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sec61bQ9CQS8 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC9.61□□□□□ -0.87
Sec61bQ9CQS8 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Sec61bQ9CQS8 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Sec61bQ9CQS8 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC9.61□□□□□ -0.87
Sec61bQ9CQS8 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sec61bQ9CQS8 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sec61bQ9CQS8 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Sec61bQ9CQS8 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC9.61□□□□□ -0.87
Sec61bQ9CQS8 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sec61bQ9CQS8 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Sec61bQ9CQS8 Gm43183-201ENSMUST00000200632 547 ntBASIC9.61□□□□□ -0.87
Sec61bQ9CQS8 Gm43799-201ENSMUST00000201845 579 ntBASIC9.61□□□□□ -0.87
Sec61bQ9CQS8 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sec61bQ9CQS8 Gm18025-201ENSMUST00000221733 862 ntBASIC9.61□□□□□ -0.87
Sec61bQ9CQS8 Timm23-208ENSMUST00000226683 750 ntBASIC9.61□□□□□ -0.87
Sec61bQ9CQS8 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sec61bQ9CQS8 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Sec61bQ9CQS8 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sec61bQ9CQS8 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sec61bQ9CQS8 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sec61bQ9CQS8 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sec61bQ9CQS8 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Sec61bQ9CQS8 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Sec61bQ9CQS8 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC9.61□□□□□ -0.87
Sec61bQ9CQS8 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Sec61bQ9CQS8 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sec61bQ9CQS8 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sec61bQ9CQS8 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Sec61bQ9CQS8 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Sec61bQ9CQS8 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sec61bQ9CQS8 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sec61bQ9CQS8 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sec61bQ9CQS8 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sec61bQ9CQS8 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Sec61bQ9CQS8 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC9.6□□□□□ -0.87
Sec61bQ9CQS8 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sec61bQ9CQS8 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sec61bQ9CQS8 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sec61bQ9CQS8 Gm37352-201ENSMUST00000193908 2181 ntBASIC9.6□□□□□ -0.87
Sec61bQ9CQS8 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC9.6□□□□□ -0.87
Sec61bQ9CQS8 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Sec61bQ9CQS8 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sec61bQ9CQS8 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sec61bQ9CQS8 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC9.6□□□□□ -0.87
Sec61bQ9CQS8 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Sec61bQ9CQS8 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC9.6□□□□□ -0.87
Sec61bQ9CQS8 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC9.6□□□□□ -0.87
Sec61bQ9CQS8 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC9.6□□□□□ -0.87
Sec61bQ9CQS8 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC9.6□□□□□ -0.87
Sec61bQ9CQS8 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sec61bQ9CQS8 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sec61bQ9CQS8 Golph3-202ENSMUST00000226517 2359 ntBASIC9.6□□□□□ -0.87
Sec61bQ9CQS8 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sec61bQ9CQS8 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms