Protein–RNA interactions for Protein: Q9CQC0

Tpbpb, Trophoblast-specific protein beta, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpbQ9CQC0 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TpbpbQ9CQC0 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TpbpbQ9CQC0 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TpbpbQ9CQC0 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TpbpbQ9CQC0 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TpbpbQ9CQC0 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TpbpbQ9CQC0 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TpbpbQ9CQC0 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.04■□□□□ 0.16
TpbpbQ9CQC0 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC16.04■□□□□ 0.16
TpbpbQ9CQC0 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TpbpbQ9CQC0 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TpbpbQ9CQC0 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TpbpbQ9CQC0 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TpbpbQ9CQC0 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TpbpbQ9CQC0 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TpbpbQ9CQC0 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TpbpbQ9CQC0 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TpbpbQ9CQC0 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TpbpbQ9CQC0 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TpbpbQ9CQC0 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.03■□□□□ 0.16
TpbpbQ9CQC0 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TpbpbQ9CQC0 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TpbpbQ9CQC0 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.02■□□□□ 0.16
TpbpbQ9CQC0 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TpbpbQ9CQC0 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TpbpbQ9CQC0 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TpbpbQ9CQC0 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TpbpbQ9CQC0 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TpbpbQ9CQC0 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TpbpbQ9CQC0 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TpbpbQ9CQC0 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.02■□□□□ 0.16
TpbpbQ9CQC0 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TpbpbQ9CQC0 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TpbpbQ9CQC0 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TpbpbQ9CQC0 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TpbpbQ9CQC0 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.02■□□□□ 0.16
TpbpbQ9CQC0 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TpbpbQ9CQC0 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TpbpbQ9CQC0 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TpbpbQ9CQC0 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TpbpbQ9CQC0 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
TpbpbQ9CQC0 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.02■□□□□ 0.15
TpbpbQ9CQC0 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.02■□□□□ 0.15
TpbpbQ9CQC0 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.02■□□□□ 0.15
TpbpbQ9CQC0 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TpbpbQ9CQC0 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TpbpbQ9CQC0 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TpbpbQ9CQC0 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TpbpbQ9CQC0 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TpbpbQ9CQC0 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TpbpbQ9CQC0 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TpbpbQ9CQC0 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.01■□□□□ 0.15
TpbpbQ9CQC0 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TpbpbQ9CQC0 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
TpbpbQ9CQC0 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TpbpbQ9CQC0 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TpbpbQ9CQC0 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TpbpbQ9CQC0 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TpbpbQ9CQC0 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TpbpbQ9CQC0 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TpbpbQ9CQC0 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.01■□□□□ 0.15
TpbpbQ9CQC0 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TpbpbQ9CQC0 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16■□□□□ 0.15
TpbpbQ9CQC0 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
TpbpbQ9CQC0 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16■□□□□ 0.15
TpbpbQ9CQC0 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TpbpbQ9CQC0 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TpbpbQ9CQC0 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TpbpbQ9CQC0 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16■□□□□ 0.15
TpbpbQ9CQC0 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TpbpbQ9CQC0 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TpbpbQ9CQC0 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TpbpbQ9CQC0 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16■□□□□ 0.15
TpbpbQ9CQC0 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TpbpbQ9CQC0 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16■□□□□ 0.15
TpbpbQ9CQC0 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16■□□□□ 0.15
TpbpbQ9CQC0 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TpbpbQ9CQC0 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
TpbpbQ9CQC0 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16■□□□□ 0.15
TpbpbQ9CQC0 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TpbpbQ9CQC0 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TpbpbQ9CQC0 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TpbpbQ9CQC0 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.99■□□□□ 0.15
TpbpbQ9CQC0 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TpbpbQ9CQC0 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.99■□□□□ 0.15
TpbpbQ9CQC0 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TpbpbQ9CQC0 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TpbpbQ9CQC0 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
TpbpbQ9CQC0 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.99■□□□□ 0.15
TpbpbQ9CQC0 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TpbpbQ9CQC0 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TpbpbQ9CQC0 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
TpbpbQ9CQC0 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
TpbpbQ9CQC0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TpbpbQ9CQC0 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TpbpbQ9CQC0 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TpbpbQ9CQC0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TpbpbQ9CQC0 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.98■□□□□ 0.15
TpbpbQ9CQC0 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TpbpbQ9CQC0 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms