Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim8Q99PJ2 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim8Q99PJ2 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim8Q99PJ2 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim8Q99PJ2 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim8Q99PJ2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim8Q99PJ2 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Trim8Q99PJ2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Trim8Q99PJ2 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim8Q99PJ2 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim8Q99PJ2 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Trim8Q99PJ2 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim8Q99PJ2 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim8Q99PJ2 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim8Q99PJ2 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.57■□□□□ 0.4
Trim8Q99PJ2 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim8Q99PJ2 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim8Q99PJ2 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.57■□□□□ 0.4
Trim8Q99PJ2 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim8Q99PJ2 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.57■□□□□ 0.4
Trim8Q99PJ2 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Trim8Q99PJ2 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim8Q99PJ2 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
Trim8Q99PJ2 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim8Q99PJ2 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Trim8Q99PJ2 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim8Q99PJ2 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim8Q99PJ2 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim8Q99PJ2 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.56■□□□□ 0.4
Trim8Q99PJ2 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.56■□□□□ 0.4
Trim8Q99PJ2 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim8Q99PJ2 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim8Q99PJ2 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim8Q99PJ2 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim8Q99PJ2 Gm13146-201ENSMUST00000118508 780 ntBASIC17.56■□□□□ 0.4
Trim8Q99PJ2 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim8Q99PJ2 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.56■□□□□ 0.4
Trim8Q99PJ2 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.56■□□□□ 0.4
Trim8Q99PJ2 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Trim8Q99PJ2 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.56■□□□□ 0.4
Trim8Q99PJ2 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim8Q99PJ2 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trim8Q99PJ2 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.56■□□□□ 0.4
Trim8Q99PJ2 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.56■□□□□ 0.4
Trim8Q99PJ2 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim8Q99PJ2 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Trim8Q99PJ2 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim8Q99PJ2 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.56■□□□□ 0.4
Trim8Q99PJ2 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim8Q99PJ2 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim8Q99PJ2 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
Trim8Q99PJ2 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim8Q99PJ2 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trim8Q99PJ2 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim8Q99PJ2 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Trim8Q99PJ2 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim8Q99PJ2 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim8Q99PJ2 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim8Q99PJ2 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim8Q99PJ2 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim8Q99PJ2 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trim8Q99PJ2 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim8Q99PJ2 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim8Q99PJ2 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim8Q99PJ2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim8Q99PJ2 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim8Q99PJ2 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Trim8Q99PJ2 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim8Q99PJ2 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Trim8Q99PJ2 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim8Q99PJ2 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim8Q99PJ2 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim8Q99PJ2 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim8Q99PJ2 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim8Q99PJ2 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Trim8Q99PJ2 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim8Q99PJ2 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim8Q99PJ2 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim8Q99PJ2 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim8Q99PJ2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Trim8Q99PJ2 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.53■□□□□ 0.4
Trim8Q99PJ2 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
Trim8Q99PJ2 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim8Q99PJ2 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim8Q99PJ2 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim8Q99PJ2 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim8Q99PJ2 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim8Q99PJ2 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.53■□□□□ 0.4
Trim8Q99PJ2 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim8Q99PJ2 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim8Q99PJ2 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim8Q99PJ2 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim8Q99PJ2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.53■□□□□ 0.4
Trim8Q99PJ2 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim8Q99PJ2 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Trim8Q99PJ2 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim8Q99PJ2 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim8Q99PJ2 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Trim8Q99PJ2 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim8Q99PJ2 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms