Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp1aQ921W0 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp1aQ921W0 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp1aQ921W0 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp1aQ921W0 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC15.85■□□□□ 0.13
Chmp1aQ921W0 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Chmp1aQ921W0 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp1aQ921W0 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp1aQ921W0 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp1aQ921W0 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp1aQ921W0 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.85■□□□□ 0.13
Chmp1aQ921W0 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.85■□□□□ 0.13
Chmp1aQ921W0 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp1aQ921W0 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp1aQ921W0 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp1aQ921W0 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp1aQ921W0 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp1aQ921W0 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp1aQ921W0 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp1aQ921W0 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp1aQ921W0 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp1aQ921W0 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp1aQ921W0 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC15.84■□□□□ 0.13
Chmp1aQ921W0 Gm9847-201ENSMUST00000052528 599 ntBASIC15.84■□□□□ 0.13
Chmp1aQ921W0 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp1aQ921W0 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp1aQ921W0 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp1aQ921W0 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp1aQ921W0 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp1aQ921W0 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Chmp1aQ921W0 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.83■□□□□ 0.13
Chmp1aQ921W0 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Chmp1aQ921W0 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Chmp1aQ921W0 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Chmp1aQ921W0 AC121961.1-201ENSMUST00000218594 1779 ntBASIC15.83■□□□□ 0.12
Chmp1aQ921W0 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp1aQ921W0 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp1aQ921W0 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp1aQ921W0 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC15.83■□□□□ 0.12
Chmp1aQ921W0 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp1aQ921W0 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.83■□□□□ 0.12
Chmp1aQ921W0 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp1aQ921W0 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp1aQ921W0 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp1aQ921W0 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp1aQ921W0 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp1aQ921W0 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp1aQ921W0 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp1aQ921W0 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp1aQ921W0 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC15.82■□□□□ 0.12
Chmp1aQ921W0 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp1aQ921W0 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Chmp1aQ921W0 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Chmp1aQ921W0 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp1aQ921W0 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp1aQ921W0 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp1aQ921W0 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp1aQ921W0 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp1aQ921W0 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp1aQ921W0 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp1aQ921W0 Gm37805-201ENSMUST00000192612 1094 ntBASIC15.82■□□□□ 0.12
Chmp1aQ921W0 Gm19094-201ENSMUST00000209791 1246 ntBASIC15.82■□□□□ 0.12
Chmp1aQ921W0 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp1aQ921W0 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Chmp1aQ921W0 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Chmp1aQ921W0 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp1aQ921W0 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp1aQ921W0 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp1aQ921W0 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
Chmp1aQ921W0 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp1aQ921W0 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp1aQ921W0 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp1aQ921W0 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp1aQ921W0 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Chmp1aQ921W0 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp1aQ921W0 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp1aQ921W0 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Chmp1aQ921W0 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp1aQ921W0 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC15.81■□□□□ 0.12
Chmp1aQ921W0 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.81■□□□□ 0.12
Chmp1aQ921W0 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp1aQ921W0 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp1aQ921W0 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Chmp1aQ921W0 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp1aQ921W0 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp1aQ921W0 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp1aQ921W0 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Chmp1aQ921W0 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp1aQ921W0 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp1aQ921W0 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp1aQ921W0 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp1aQ921W0 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp1aQ921W0 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp1aQ921W0 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Chmp1aQ921W0 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Chmp1aQ921W0 Gm10167-201ENSMUST00000150411 1479 ntBASIC15.8■□□□□ 0.12
Chmp1aQ921W0 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp1aQ921W0 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC15.8■□□□□ 0.12
Chmp1aQ921W0 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.8■□□□□ 0.12
Chmp1aQ921W0 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms